RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CITED2Q99967 270 aaPredicted RBP7.32□□□□□ -1.24
TMEM116-216ENST00000552800 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 ZNF256Q9Y2P7 627 aaPredicted RBP7.32□□□□□ -1.24
TMEM116-216ENST00000552800 CUBNO60494 3623 aa7.32□□□□□ -1.24
TMEM116-216ENST00000552800 NSD1Q96L73 2696 aaPredicted RBP7.32□□□□□ -1.24
TMEM116-216ENST00000552800 ZNF324O75467 553 aaPredicted RBP7.31□□□□□ -1.24
TMEM116-216ENST00000552800 APCSP02743 223 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 NDUFA6P56556 154 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 Q8TAT8 98 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 C11orf21Q9P2W6 132 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 U3KQK5 164 aa7.31□□□□□ -1.24
TMEM116-216ENST00000552800 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
TMEM116-216ENST00000552800 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 INAFM1C9JVW0 142 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 TCL1AP56279 114 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 RPL11P62913 178 aaKnown RBP7.3□□□□□ -1.24
TMEM116-216ENST00000552800 SLAQ13239 276 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 LYZL1Q6UWQ5 148 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 PGLYRP4Q96LB8 373 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 LINC00467Q9BRT7 94 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 ALKBH7Q9BT30 221 aaPredicted RBP7.3□□□□□ -1.24
TMEM116-216ENST00000552800 TMEM191AQ9H0A3 160 aa7.3□□□□□ -1.24
TMEM116-216ENST00000552800 SORL1Q92673 2214 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 ARMS2P0C7Q2 107 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 TSPOP30536 169 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 LEPP41159 167 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 CACNG7P62955 275 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 DEFB136Q30KP8 78 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 MRPL54Q6P161 138 aaKnown RBP7.29□□□□□ -1.24
TMEM116-216ENST00000552800 FER1L6-AS1Q8NA97 138 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 C20orf144Q9BQM9 153 aa7.29□□□□□ -1.24
TMEM116-216ENST00000552800 LOC102724200A0A096LPH7 203 aaPredicted RBP7.28□□□□□ -1.24
TMEM116-216ENST00000552800 NXPH4O95158 308 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 IGLV1-51P01701 117 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 ORM1P02763 201 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 GZMBP10144 247 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 HLA-DRB4P13762 266 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 LINC00310P59036 64 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 KRTAP10-3P60369 221 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 PRR9Q5T870 116 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 FAM104BQ5XKR9 115 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 EBLN2Q6P2I7 272 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 TMEM61Q8N0U2 210 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 LINC00518Q8N0U6 118 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 POM121L12Q8N7R1 296 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 PTH2Q96A98 100 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 KCNS1Q96KK3 526 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 HLA-DRB4X5D2U9 266 aa7.28□□□□□ -1.24
TMEM116-216ENST00000552800 OR4C46A6NHA9 309 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 H3BMM0 161 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 PPBPP02775 128 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 GPX1P07203 203 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 CDKN1BP46527 198 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 BEAN1Q3B7T3 259 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 BORCS7Q96B45 105 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
TMEM116-216ENST00000552800 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 F6UB75 175 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 SPINK4O60575 86 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 ZNF688P0C7X2 276 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 SMIM6P0DI80 62 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 NTF3P20783 257 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 CAMPP49913 170 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 INSL3P51460 131 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 CD300EQ496F6 205 aaPredicted RBP7.26□□□□□ -1.25
TMEM116-216ENST00000552800 PSMG4Q5JS54 123 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 GFI1BQ5VTD9 330 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 CITED1Q99966 193 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 C2CD3Q4AC94 2353 aa7.26□□□□□ -1.25
TMEM116-216ENST00000552800 SETXQ7Z333 2677 aaKnown RBP7.25□□□□□ -1.25
TMEM116-216ENST00000552800 AGRNO00468 2067 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 C7orf71A4D174 169 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 NUPR1O60356 82 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 AMBPP02760 352 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 ZNF705DP0CH99 300 aaPredicted RBP7.25□□□□□ -1.25
TMEM116-216ENST00000552800 ZNF705BP0CI00 300 aaPredicted RBP7.25□□□□□ -1.25
TMEM116-216ENST00000552800 RNASE3P12724 160 aaKnown RBP7.25□□□□□ -1.25
TMEM116-216ENST00000552800 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 TMEM256Q8N2U0 113 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 WFDC9Q8NEX5 89 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 TMEM18Q96B42 140 aa7.25□□□□□ -1.25
TMEM116-216ENST00000552800 CHCHD1Q96BP2 118 aaKnown RBP7.25□□□□□ -1.25
TMEM116-216ENST00000552800 CRXO43186 299 aaPredicted RBP7.24□□□□□ -1.25
TMEM116-216ENST00000552800 RAB4AP20338 218 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 PMCHP20382 165 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 SRIP30626 198 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 RAB4BP61018 213 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 JOSD1Q15040 202 aaPredicted RBP7.24□□□□□ -1.25
TMEM116-216ENST00000552800 ANXA2RQ3ZCQ2 193 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 LINC00482Q8N8I6 264 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 RNF185Q96GF1 192 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 DUX3Q96PT4 197 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 NDUFAF3Q9BU61 184 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 MAP6D1Q9H9H5 199 aa7.24□□□□□ -1.25
TMEM116-216ENST00000552800 IGKV3-7A0A075B6H7 116 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms