RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 IGHV3-30-5P0DP03 117 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 RAB31Q13636 194 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 Q6ZRU5 148 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 LINC00305Q7Z4B0 112 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 ATP5SQ99766 215 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 A0A0D9SG52 128 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 LOC100131303A0A0U1RQF7 123 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 RNF222A6NCQ9 220 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 NMBP08949 121 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 CRISP2P16562 243 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 ERCC8Q13216 396 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 OPCMLQ14982 345 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 OR11H4Q8NGC9 324 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 SCGB1C1Q8TD33 95 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 RASL10AQ92737 203 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 MRPL53Q96EL3 112 aaKnown RBP7.78□□□□□ -1.16
PTCH1-222ENST00000551425 HYLS1Q96M11 299 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 LINC00477Q96M19 166 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 ARPC5LQ9BPX5 153 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 SMIM3Q9BZL3 60 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 WDR83OSQ9Y284 106 aa7.78□□□□□ -1.16
PTCH1-222ENST00000551425 TRAV8-3A0A0A6YYJ7 113 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 UBE2L5PA0A1B0GUS4 154 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 TAAR5O14804 337 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 PFDN1O60925 122 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 GPX1P07203 203 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 FGF7P21781 194 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 ZNF266Q14584 549 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 ZNF345Q14585 488 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 GUK1Q16774 197 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 Q8N976 141 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 NHLRC2Q8NBF2 726 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 BAALCQ8WXS3 180 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 PAXXQ9BUH6 204 aa7.77□□□□□ -1.17
PTCH1-222ENST00000551425 WDR61Q9GZS3 305 aaKnown RBP7.77□□□□□ -1.17
PTCH1-222ENST00000551425 AGPAT2O15120 278 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 ZNF253O75346 499 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 CAMLGP49069 296 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 ZFP69Q49AA0 526 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 Q6ZQT7 251 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 KCNRGQ8N5I3 272 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 ZFAND2AQ8N6M9 145 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 MGST2Q99735 147 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 AGPAT4-IT1Q9H0P7 198 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 WFDC1Q9HC57 220 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 COX11Q9Y6N1 276 aa7.76□□□□□ -1.17
PTCH1-222ENST00000551425 BORCS7-ASMTA0A0B4J1R7 106 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 TRAV4A0A0B4J268 109 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 C17orf112F2Z3M2 114 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 GAS8-AS1O95177 125 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
PTCH1-222ENST00000551425 RPL29P47914 159 aaKnown RBP7.75□□□□□ -1.17
PTCH1-222ENST00000551425 PRR9Q5T870 116 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 LELP1Q5T871 98 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 SPXQ9BT56 116 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 KCNIP2Q9NS61 270 aa7.75□□□□□ -1.17
PTCH1-222ENST00000551425 KANTRA0A1W2PQU2 76 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 M0R3E3 92 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 COX7A2P2O60397 106 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 Q6ZRG5 221 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 TMUB2Q71RG4 321 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 ATP6V0E2Q8NHE4 81 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 NPCDR1Q9BY65 106 aa7.74□□□□□ -1.17
PTCH1-222ENST00000551425 GATA1P15976 413 aaPredicted RBP7.73□□□□□ -1.17
PTCH1-222ENST00000551425 LGALSLQ3ZCW2 172 aaPredicted RBP7.73□□□□□ -1.17
PTCH1-222ENST00000551425 TOR2AQ5JU69 321 aa7.73□□□□□ -1.17
PTCH1-222ENST00000551425 MIC13Q5XKP0 118 aa7.73□□□□□ -1.17
PTCH1-222ENST00000551425 OR4C5Q8NGB2 326 aa7.73□□□□□ -1.17
PTCH1-222ENST00000551425 PRELID1Q9Y255 219 aa7.73□□□□□ -1.17
PTCH1-222ENST00000551425 BCL2L11O43521 198 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 EIF5AP63241 154 aaKnown RBP7.72□□□□□ -1.17
PTCH1-222ENST00000551425 C10orf113Q5VZT2 155 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
PTCH1-222ENST00000551425 Q8N3U1 123 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 OR1L4Q8NGR5 311 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 PFDN5Q99471 154 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 CYTL1Q9NRR1 136 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 SLC39A9Q9NUM3 307 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 TIMM9Q9Y5J7 89 aa7.72□□□□□ -1.17
PTCH1-222ENST00000551425 TRBV19A0A075B6N1 114 aa7.71□□□□□ -1.18
PTCH1-222ENST00000551425 ATP6V0CP27449 155 aa7.71□□□□□ -1.18
PTCH1-222ENST00000551425 TMEM78Q5T7P6 136 aa7.71□□□□□ -1.18
PTCH1-222ENST00000551425 HSD17B11Q8NBQ5 300 aa7.71□□□□□ -1.18
PTCH1-222ENST00000551425 PSMG3Q9BT73 122 aaPredicted RBP7.71□□□□□ -1.18
PTCH1-222ENST00000551425 ZNF471Q9BX82 626 aaPredicted RBP7.71□□□□□ -1.18
PTCH1-222ENST00000551425 GTSF1LQ9H1H1 148 aa7.71□□□□□ -1.18
PTCH1-222ENST00000551425 ZNF492Q9P255 531 aa7.71□□□□□ -1.18
PTCH1-222ENST00000551425 TRBV7-9A0A0J9YWB2 115 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 NDUFB4O95168 129 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 SERF2P84101 59 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 FFAR4Q5NUL3 377 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 MUC21Q5SSG8 566 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 C9orf62Q8N4C0 152 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 RMI2Q96E14 147 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 RPH3ALQ9UNE2 315 aa7.7□□□□□ -1.18
PTCH1-222ENST00000551425 TRGV11A0A075B6L2 103 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms