RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 UQCC3Q6UW78 93 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 LINC01551Q86U37 167 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 C11orf72Q8NBR9 251 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 SMIM12Q96EX1 92 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 RYR3Q15413 4870 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 FABP5P3A8MUU1 101 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 M0R036 132 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 GNRH2O43555 120 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 TYMSP04818 313 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 MIFP14174 115 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 IL17DQ8TAD2 202 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
ERBB3-215ENST00000550828 A0A0J9YWU9 116 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 SMIM9A6NGZ8 99 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 KRBOX1C9JBD0 128 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 RPL23P62829 140 aaKnown RBP9.67□□□□□ -0.86
ERBB3-215ENST00000550828 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 SLC7A5P1Q8MH63 180 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
ERBB3-215ENST00000550828 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
ERBB3-215ENST00000550828 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 MDFICQ9P1T7 246 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 U3KQK5 164 aa9.67□□□□□ -0.86
ERBB3-215ENST00000550828 IGHV3-16A0A0C4DH30 117 aa9.66□□□□□ -0.86
ERBB3-215ENST00000550828 CBY3A6NI87 242 aa9.66□□□□□ -0.86
ERBB3-215ENST00000550828 TMEM241Q24JQ0 296 aa9.66□□□□□ -0.86
ERBB3-215ENST00000550828 FAM159AQ6UWV7 190 aa9.66□□□□□ -0.86
ERBB3-215ENST00000550828 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
ERBB3-215ENST00000550828 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
ERBB3-215ENST00000550828 NAT8Q9UHE5 227 aa9.66□□□□□ -0.86
ERBB3-215ENST00000550828 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 B4DEV8 164 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 ORM1P02763 201 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 NUDT10Q8NFP7 164 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 NUDT11Q96G61 164 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 C16orf74Q96GX8 76 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 EDA2RQ9HAV5 297 aa9.65□□□□□ -0.86
ERBB3-215ENST00000550828 GRIFINA4D1Z8 144 aa9.64□□□□□ -0.87
ERBB3-215ENST00000550828 GZMBP10144 247 aa9.64□□□□□ -0.87
ERBB3-215ENST00000550828 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
ERBB3-215ENST00000550828 EMP1P54849 157 aa9.64□□□□□ -0.87
ERBB3-215ENST00000550828 TCL1AP56279 114 aa9.64□□□□□ -0.87
ERBB3-215ENST00000550828 ADIRFQ15847 76 aa9.64□□□□□ -0.87
ERBB3-215ENST00000550828 DNAH7Q8WXX0 4024 aa9.64□□□□□ -0.87
ERBB3-215ENST00000550828 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 C10orf91Q5T1B1 145 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
ERBB3-215ENST00000550828 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 FAM231DQ6ZW35 169 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 DKK2Q9UBU2 259 aa9.63□□□□□ -0.87
ERBB3-215ENST00000550828 TRGV11A0A075B6L2 103 aa9.62□□□□□ -0.87
ERBB3-215ENST00000550828 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
ERBB3-215ENST00000550828 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
ERBB3-215ENST00000550828 FAM222AQ5U5X8 452 aa9.62□□□□□ -0.87
ERBB3-215ENST00000550828 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
ERBB3-215ENST00000550828 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
ERBB3-215ENST00000550828 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
ERBB3-215ENST00000550828 F8W036 122 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 H3BVH4 76 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 P01737 135 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 CXCL1P09341 107 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 DAZ2Q13117 558 aaKnown RBP9.61□□□□□ -0.87
ERBB3-215ENST00000550828 Q6ZTI0 123 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 SEC11CQ9BY50 192 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 RPP21Q9H633 154 aaKnown RBP9.61□□□□□ -0.87
ERBB3-215ENST00000550828 OSTCQ9NRP0 149 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 CARHSP1Q9Y2V2 147 aaKnown RBP9.61□□□□□ -0.87
ERBB3-215ENST00000550828 V9GYV3 84 aa9.61□□□□□ -0.87
ERBB3-215ENST00000550828 ASIPP42127 132 aa9.6□□□□□ -0.87
ERBB3-215ENST00000550828 ERVFC1-1P60608 527 aa9.6□□□□□ -0.87
ERBB3-215ENST00000550828 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
ERBB3-215ENST00000550828 SFRP2Q96HF1 295 aa9.6□□□□□ -0.87
ERBB3-215ENST00000550828 SCRT2Q9NQ03 307 aa9.6□□□□□ -0.87
ERBB3-215ENST00000550828 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
ERBB3-215ENST00000550828 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
ERBB3-215ENST00000550828 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 GATCO43716 136 aaKnown RBP9.59□□□□□ -0.87
ERBB3-215ENST00000550828 SPINK4O60575 86 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 C12orf74Q32Q52 190 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 GTSF1Q8WW33 167 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
ERBB3-215ENST00000550828 DYNC2H1Q8NCM8 4307 aaKnown RBP9.59□□□□□ -0.87
ERBB3-215ENST00000550828 LYRM9A8MSI8 78 aa9.58□□□□□ -0.88
ERBB3-215ENST00000550828 NANOS2P60321 138 aaKnown RBP9.58□□□□□ -0.88
ERBB3-215ENST00000550828 OR10G8Q8NGN5 311 aa9.58□□□□□ -0.88
ERBB3-215ENST00000550828 MUC21A0A0G2JKD1 596 aa9.57□□□□□ -0.88
ERBB3-215ENST00000550828 MUC21A0A140T8X8 626 aa9.57□□□□□ -0.88
ERBB3-215ENST00000550828 GAGE12BA1L429 117 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms