RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 IGHV3-38A0A0C4DH36 116 aa14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 EIF3GO75821 320 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 SMR3BP02814 79 aaPredicted RBP14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 GATA1P15976 413 aaPredicted RBP14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 CMTM2Q8TAZ6 248 aa14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 TVP23CQ96ET8 276 aa14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 MBD2Q9UBB5 411 aa14.57□□□□□ -0.08
SMARCC2-210ENST00000550519 LRCOL1A6NCL2 159 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 TYMSP04818 313 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 FAM74A1Q5RGS3 127 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 SCGB1C1Q8TD33 95 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 S100ZQ8WXG8 99 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 RPH3ALQ9UNE2 315 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 MYCBP2O75592 4640 aa14.56□□□□□ -0.08
SMARCC2-210ENST00000550519 LINC01556Q5JQF7 62 aa14.55□□□□□ -0.08
SMARCC2-210ENST00000550519 GOLT1AQ6ZVE7 132 aa14.55□□□□□ -0.08
SMARCC2-210ENST00000550519 NHLRC2Q8NBF2 726 aa14.55□□□□□ -0.08
SMARCC2-210ENST00000550519 FLG2Q5D862 2391 aaPredicted RBP14.55□□□□□ -0.08
SMARCC2-210ENST00000550519 IBA57-AS1B1ANH7 110 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 F6UZH7 168 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 INMT-MINDY4F8WBC2 141 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 MPC2O95563 127 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 NTN5Q8WTR8 489 aaPredicted RBP14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 KCNS1Q96KK3 526 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 SMIM3Q9BZL3 60 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 SDF2L1Q9HCN8 221 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 TREM1Q9NP99 234 aa14.54□□□□□ -0.08
SMARCC2-210ENST00000550519 IGLV5-52A0A0A0MRZ9 124 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 TRAV8-1A0A0A6YYK1 113 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 PSCAO43653 123 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 UPK1BO75841 260 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 RPL12P30050 165 aaKnown RBP14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 PPT1P50897 306 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 PQLC2Q6ZP29 291 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 TMEM70Q9BUB7 260 aa14.53□□□□□ -0.08
SMARCC2-210ENST00000550519 PFN1P07737 140 aaKnown RBP14.52□□□□□ -0.09
SMARCC2-210ENST00000550519 PET100P0DJ07 73 aa14.52□□□□□ -0.09
SMARCC2-210ENST00000550519 IFITM3Q01628 133 aa14.52□□□□□ -0.09
SMARCC2-210ENST00000550519 SLC25A29Q8N8R3 303 aa14.52□□□□□ -0.09
SMARCC2-210ENST00000550519 WFDC1Q9HC57 220 aa14.52□□□□□ -0.09
SMARCC2-210ENST00000550519 FBLL1A6NHQ2 334 aaKnown RBP14.51□□□□□ -0.09
SMARCC2-210ENST00000550519 FAM229AH3BQW9 127 aa14.51□□□□□ -0.09
SMARCC2-210ENST00000550519 HAMPP81172 84 aa14.51□□□□□ -0.09
SMARCC2-210ENST00000550519 ACOT6Q3I5F7 207 aaPredicted RBP14.51□□□□□ -0.09
SMARCC2-210ENST00000550519 ASB13Q8WXK3 278 aa14.51□□□□□ -0.09
SMARCC2-210ENST00000550519 BOLA1Q9Y3E2 137 aa14.51□□□□□ -0.09
SMARCC2-210ENST00000550519 TRAV8-6A0A0B4J262 113 aa14.5□□□□□ -0.09
SMARCC2-210ENST00000550519 A0A1W2PPV4 95 aa14.5□□□□□ -0.09
SMARCC2-210ENST00000550519 CIDEAO60543 219 aa14.5□□□□□ -0.09
SMARCC2-210ENST00000550519 GNG5P63218 68 aa14.5□□□□□ -0.09
SMARCC2-210ENST00000550519 MARVELD1Q9BSK0 173 aa14.5□□□□□ -0.09
SMARCC2-210ENST00000550519 TRBV6-4A0A1B0GX49 114 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 RS1O15537 224 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 ZNF876PQ49A33 203 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 CFAP126Q5VTH2 177 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 DPPA3Q6W0C5 159 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 Q8N814 137 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 C11orf21Q9P2W6 132 aa14.49□□□□□ -0.09
SMARCC2-210ENST00000550519 RAB2AP61019 212 aa14.48□□□□□ -0.09
SMARCC2-210ENST00000550519 RHOHQ15669 191 aa14.48□□□□□ -0.09
SMARCC2-210ENST00000550519 OR10J3Q5JRS4 329 aa14.48□□□□□ -0.09
SMARCC2-210ENST00000550519 PRADC1Q9BSG0 188 aa14.48□□□□□ -0.09
SMARCC2-210ENST00000550519 HMGB3O15347 200 aaKnown RBP14.47□□□□□ -0.09
SMARCC2-210ENST00000550519 ZNF80P51504 273 aaPredicted RBP14.47□□□□□ -0.09
SMARCC2-210ENST00000550519 LELP1Q5T871 98 aa14.47□□□□□ -0.09
SMARCC2-210ENST00000550519 SGK494Q96LW2 274 aa14.47□□□□□ -0.09
SMARCC2-210ENST00000550519 Q9HAA7 133 aa14.47□□□□□ -0.09
SMARCC2-210ENST00000550519 SERTM2A0A1B0GWG4 89 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 SSNA1O43805 119 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 Q6ZSN1 163 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 OR10G9Q8NGN4 311 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 OR10G7Q8NGN6 311 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 C9orf85Q96MD7 179 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 NDFIP1Q9BT67 221 aa14.46□□□□□ -0.09
SMARCC2-210ENST00000550519 IGHV3-30P01768 117 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 IGHV3-33P01772 117 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 IGHV3-30-3P0DP02 117 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 IGHV3-30-5P0DP03 117 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 PTH2Q96A98 100 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 GTSF1LQ9H1H1 148 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 FAM30AQ9NZY2 134 aa14.45□□□□□ -0.1
SMARCC2-210ENST00000550519 IGHV3-73A0A0B4J1V6 119 aa14.44□□□□□ -0.1
SMARCC2-210ENST00000550519 TAAR5O14804 337 aa14.44□□□□□ -0.1
SMARCC2-210ENST00000550519 TCRAP04437 139 aa14.44□□□□□ -0.1
SMARCC2-210ENST00000550519 ARL14EPLP0DKL9 152 aa14.44□□□□□ -0.1
SMARCC2-210ENST00000550519 C5orf17Q8NAS9 161 aa14.44□□□□□ -0.1
SMARCC2-210ENST00000550519 PGPEP1LA6NFU8 196 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 GCGP01275 180 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 C1QBP02746 253 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 STAG3L2P0CL84 134 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 STAG3L3P0CL85 134 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 LAGE3Q14657 143 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 ZNF506Q5JVG8 444 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 ATP6V0E2Q8NHE4 81 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 SUN5Q8TC36 379 aa14.43□□□□□ -0.1
SMARCC2-210ENST00000550519 IGLV2-11P01706 119 aa14.42□□□□□ -0.1
SMARCC2-210ENST00000550519 MGST1P10620 155 aaKnown RBP14.42□□□□□ -0.1
SMARCC2-210ENST00000550519 RNASE3P12724 160 aaKnown RBP14.42□□□□□ -0.1
SMARCC2-210ENST00000550519 CDC34P49427 236 aaPredicted RBP14.42□□□□□ -0.1
SMARCC2-210ENST00000550519 TMEM75Q8N9X5 138 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms