RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 DPH3Q96FX2 82 aa1.84□□□□□ -2.11
USP15-213ENST00000549268 MED9Q9NWA0 146 aa1.84□□□□□ -2.11
USP15-213ENST00000549268 CCDC167Q9P0B6 97 aa1.84□□□□□ -2.11
USP15-213ENST00000549268 UNC13CQ8NB66 2214 aa1.84□□□□□ -2.11
USP15-213ENST00000549268 BAZ1AQ9NRL2 1556 aaPredicted RBP1.84□□□□□ -2.12
USP15-213ENST00000549268 MYOFQ9NZM1 2061 aa1.84□□□□□ -2.12
USP15-213ENST00000549268 COL4A1P02462 1669 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 UHRF1BP1LA0JNW5 1464 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 MBD5Q9P267 1494 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 IDO2Q6ZQW0 420 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 SLC25A26Q70HW3 274 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 TCTEX1D1Q8N7M0 179 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 LIMD2Q9BT23 127 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 ADGRB1O14514 1584 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 PTPRFP10586 1907 aa1.83□□□□□ -2.12
USP15-213ENST00000549268 SMG6Q86US8 1419 aaKnown RBP1.83□□□□□ -2.12
USP15-213ENST00000549268 KIDINS220Q9ULH0 1771 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 KIAA1549LQ6ZVL6 1849 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 A0A1W2PRS3 328 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 INE1O15225 51 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 DNAL4O96015 105 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 IFNGP01579 166 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 APODP05090 189 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 SCIMPQ6UWF3 145 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.82□□□□□ -2.12
USP15-213ENST00000549268 TMEM203Q969S6 136 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 NALCNQ8IZF0 1738 aa1.82□□□□□ -2.12
USP15-213ENST00000549268 RB1CC1Q8TDY2 1594 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 ARFGEF3Q5TH69 2177 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 INTS1Q8N201 2190 aaKnown RBP1.81□□□□□ -2.12
USP15-213ENST00000549268 SDK1Q7Z5N4 2213 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 LOC110117498A0A087WWA1 95 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 IGKV2-29A2NJV5 120 aaPredicted RBP1.81□□□□□ -2.12
USP15-213ENST00000549268 MIF4GDA9UHW6 222 aaKnown RBP1.81□□□□□ -2.12
USP15-213ENST00000549268 J3QLW9 94 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 M0R2N4 97 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 PPYP01298 95 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 ZNF25P17030 456 aaPredicted RBP1.81□□□□□ -2.12
USP15-213ENST00000549268 MEIG1Q5JSS6 88 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 CSAG1Q6PB30 78 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 C3orf62Q6ZUJ4 267 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 KCNRGQ8N5I3 272 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 PSMG3Q9BT73 122 aaPredicted RBP1.81□□□□□ -2.12
USP15-213ENST00000549268 PDCD10Q9BUL8 212 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 TAS2R8Q9NYW2 309 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 ZFP30Q9Y2G7 519 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 SNURFQ9Y675 71 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 KIF13AQ9H1H9 1805 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 TRPM7Q96QT4 1865 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 BCL9LQ86UU0 1499 aa1.81□□□□□ -2.12
USP15-213ENST00000549268 ANK1P16157 1881 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 ALPK3Q96L96 1907 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 EML5Q05BV3 1969 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 TRAV12-2A0A075B6T6 113 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 SPAARA0A1B0GVQ0 90 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 GEMIN2O14893 280 aaKnown RBP1.8□□□□□ -2.12
USP15-213ENST00000549268 PRB1P04280 392 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 PRB4P10163 310 aaPredicted RBP1.8□□□□□ -2.12
USP15-213ENST00000549268 S100A1P23297 94 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 WHAMMP3Q1A5X7 153 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 OCIAD2Q56VL3 154 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 UNQ6190/PRO20217Q6UXQ8 127 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 ADGRB2O60241 1585 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 LRP5O75197 1615 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 SIP14410 1827 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 SPEF2Q9C093 1822 aa1.8□□□□□ -2.12
USP15-213ENST00000549268 TNRC6BQ9UPQ9 1833 aaKnown RBP1.8□□□□□ -2.12
USP15-213ENST00000549268 MYH7P12883 1935 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 EXPH5Q8NEV8 1989 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 CACNA1AO00555 2505 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 IGKV3D-7A0A0C4DH55 119 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 IGKV3OR2-268A0A0C4DH90 116 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 JMJD7-PLA2G4BH0Y9G9 81 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 KLF7O75840 302 aaPredicted RBP1.79□□□□□ -2.12
USP15-213ENST00000549268 IGKCP01834 107 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 IL7P13232 177 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 LINC01545Q5VT33 79 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 VSTM2AQ8TAG5 236 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 DYNLRB2Q8TF09 96 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 SNRNP25Q9BV90 132 aaKnown RBP1.79□□□□□ -2.12
USP15-213ENST00000549268 TMEM14CQ9P0S9 112 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 GNG8Q9UK08 70 aa1.79□□□□□ -2.12
USP15-213ENST00000549268 TRAV17A0A0B4J275 112 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 A0A0J9YY99 117 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 F6UZH7 168 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 CCDC179H3BU77 68 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 IGLV3-1P01715 115 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 HIST1H1DP16402 221 aaKnown RBP1.78□□□□□ -2.12
USP15-213ENST00000549268 FGF7P21781 194 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 S100PP25815 95 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 RHOHQ15669 191 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 LINC00322Q6ZN03 302 aaPredicted RBP1.78□□□□□ -2.12
USP15-213ENST00000549268 LINC00299Q6ZSB3 139 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 CYSTM1Q9H1C7 97 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 WFDC10AQ9H1F0 79 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 SCN3BQ9NY72 215 aa1.78□□□□□ -2.12
USP15-213ENST00000549268 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
USP15-213ENST00000549268 POLR2JP52435 117 aaKnown RBP1.77□□□□□ -2.13
USP15-213ENST00000549268 KRTAP21-3Q3LHN1 58 aa1.77□□□□□ -2.13
USP15-213ENST00000549268 LYPD5Q6UWN5 251 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms