RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SUMO2P61956 95 aaKnown RBP17.69■□□□□ 0.42
NPAS3-206ENST00000548645 VMO1Q7Z5L0 202 aa17.69■□□□□ 0.42
NPAS3-206ENST00000548645 C20orf78Q9BR46 151 aa17.69■□□□□ 0.42
NPAS3-206ENST00000548645 APC2O95996 2303 aa17.69■□□□□ 0.42
NPAS3-206ENST00000548645 LCNL1Q6ZST4 164 aa17.69■□□□□ 0.42
NPAS3-206ENST00000548645 FAM110DQ8TAY7 271 aaPredicted RBP17.69■□□□□ 0.42
NPAS3-206ENST00000548645 ADGRG4Q8IZF6 3080 aa17.69■□□□□ 0.42
NPAS3-206ENST00000548645 WNK2Q9Y3S1 2297 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 PRADC1Q9BSG0 188 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 ACACAQ13085 2346 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 SPTBN4Q9H254 2564 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 ARHGAP32A7KAX9 2087 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 CLPSL1A2RUU4 121 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 IGHV3OR16-13A0A075B7E8 117 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 IGHV3-74A0A0B4J1X5 117 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 TIMD4Q96H15 378 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 MSRB2Q9Y3D2 182 aa17.68■□□□□ 0.42
NPAS3-206ENST00000548645 C8orf86Q6ZUL3 223 aa17.67■□□□□ 0.42
NPAS3-206ENST00000548645 ZNF815PA8K554 130 aa17.67■□□□□ 0.42
NPAS3-206ENST00000548645 NBL1P41271 181 aa17.67■□□□□ 0.42
NPAS3-206ENST00000548645 SCGB1D4Q6XE38 83 aa17.67■□□□□ 0.42
NPAS3-206ENST00000548645 LINC01549A6NIU2 74 aa17.66■□□□□ 0.42
NPAS3-206ENST00000548645 SYT8Q8NBV8 401 aa17.66■□□□□ 0.42
NPAS3-206ENST00000548645 Q6ZQT7 251 aa17.66■□□□□ 0.42
NPAS3-206ENST00000548645 BAALCQ8WXS3 180 aa17.66■□□□□ 0.42
NPAS3-206ENST00000548645 SRSF9Q13242 221 aaKnown RBP eCLIP17.65■□□□□ 0.42
NPAS3-206ENST00000548645 METTL26Q96S19 204 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 SMCPP49901 116 aaPredicted RBP17.65■□□□□ 0.42
NPAS3-206ENST00000548645 Q8N9W7 124 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 RASL10AQ92737 203 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 UBE2D1P51668 147 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 ECSCRQ19T08 205 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 C2orf66Q6UXQ4 117 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 VKORC1Q9BQB6 163 aa17.65■□□□□ 0.42
NPAS3-206ENST00000548645 TACC2O95359 2948 aa17.64■□□□□ 0.42
NPAS3-206ENST00000548645 MINOS1Q5TGZ0 78 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 CLEC19AQ6UXS0 136 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 MINOS1-NBL1R4GNA1 71 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 PIEZO2Q9H5I5 2752 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 LY6HO94772 140 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 LYRM7Q5U5X0 104 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 LINC01560Q8TB33 94 aa17.64■□□□□ 0.41
NPAS3-206ENST00000548645 LOC107984156A0A0G2JMH3 177 aa17.63■□□□□ 0.41
NPAS3-206ENST00000548645 PRSS29PA6NIE9 313 aa17.63■□□□□ 0.41
NPAS3-206ENST00000548645 PSMB2P49721 201 aa17.63■□□□□ 0.41
NPAS3-206ENST00000548645 ARL17AQ8IVW1 177 aa17.63■□□□□ 0.41
NPAS3-206ENST00000548645 IGHV3-49A0A0A0MS15 119 aa17.63■□□□□ 0.41
NPAS3-206ENST00000548645 DPH3P1Q9H4G8 78 aa17.63■□□□□ 0.41
NPAS3-206ENST00000548645 KLK9Q2XQG4 91 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 Q8NA96 180 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 CLUHP3Q96NS8 147 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 CDIP1Q9H305 208 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 KLK9Q9UKQ9 250 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 LENEPQ9Y5L5 61 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 ATMQ13315 3056 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 CENPVL3A0A0U1RRI6 287 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 M0R381 172 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 TSPAN13O95857 204 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 C1orf122Q6ZSJ8 110 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 CCDC140Q96MF4 163 aa17.62■□□□□ 0.41
NPAS3-206ENST00000548645 ANKRD11Q6UB99 2663 aaPredicted RBP17.62■□□□□ 0.41
NPAS3-206ENST00000548645 NFE4Q86UQ8 179 aa17.61■□□□□ 0.41
NPAS3-206ENST00000548645 RPL39LQ96EH5 51 aaKnown RBP17.61■□□□□ 0.41
NPAS3-206ENST00000548645 COX6B1P14854 86 aa17.61■□□□□ 0.41
NPAS3-206ENST00000548645 PRR9Q5T870 116 aa17.61■□□□□ 0.41
NPAS3-206ENST00000548645 PLEKHB2Q96CS7 222 aa17.61■□□□□ 0.41
NPAS3-206ENST00000548645 C16orf92Q96LL3 132 aa17.61■□□□□ 0.41
NPAS3-206ENST00000548645 UBE2D3P61077 147 aa17.6■□□□□ 0.41
NPAS3-206ENST00000548645 UBE2D2P62837 147 aa17.6■□□□□ 0.41
NPAS3-206ENST00000548645 ZNF418Q8TF45 676 aaPredicted RBP17.6■□□□□ 0.41
NPAS3-206ENST00000548645 GEMIN7Q9H840 131 aaKnown RBP17.6■□□□□ 0.41
NPAS3-206ENST00000548645 SPINK8P0C7L1 97 aa17.6■□□□□ 0.41
NPAS3-206ENST00000548645 S100A4P26447 101 aaKnown RBP17.59■□□□□ 0.41
NPAS3-206ENST00000548645 CRYBA4P53673 196 aa17.59■□□□□ 0.41
NPAS3-206ENST00000548645 EEF1AKMT3Q96AZ1 226 aa17.59■□□□□ 0.41
NPAS3-206ENST00000548645 ATP6V0E1O15342 81 aa17.59■□□□□ 0.41
NPAS3-206ENST00000548645 C14orf178Q8N769 122 aaPredicted RBP17.59■□□□□ 0.41
NPAS3-206ENST00000548645 ZFP2Q6ZN57 461 aa17.58■□□□□ 0.41
NPAS3-206ENST00000548645 PHLDA3Q9Y5J5 127 aa17.58■□□□□ 0.4
NPAS3-206ENST00000548645 U3KQE9 123 aa17.58■□□□□ 0.4
NPAS3-206ENST00000548645 PPP1R17O96001 155 aa17.58■□□□□ 0.4
NPAS3-206ENST00000548645 CD7P09564 240 aa17.58■□□□□ 0.4
NPAS3-206ENST00000548645 SFTA2Q6UW10 78 aa17.58■□□□□ 0.4
NPAS3-206ENST00000548645 PPDPFLQ8WWR9 84 aa17.58■□□□□ 0.4
NPAS3-206ENST00000548645 VCX2Q9H322 139 aa17.57■□□□□ 0.4
NPAS3-206ENST00000548645 TRBV7-1A0A0A6YYK4 115 aa17.57■□□□□ 0.4
NPAS3-206ENST00000548645 TRAV21A0A0B4J279 112 aa17.57■□□□□ 0.4
NPAS3-206ENST00000548645 MGPP08493 103 aa17.57■□□□□ 0.4
NPAS3-206ENST00000548645 ASIPP42127 132 aa17.57■□□□□ 0.4
NPAS3-206ENST00000548645 TRAV26-1A0A087WT03 109 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 HERVK_113P61574 105 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 C9orf139Q6ZV77 190 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 J3KRW8 73 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 PAPPA-AS1Q5QFB9 102 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 TEN1Q86WV5 123 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 LINC00477Q96M19 166 aa17.56■□□□□ 0.4
NPAS3-206ENST00000548645 RNF223E7ERA6 249 aa17.55■□□□□ 0.4
NPAS3-206ENST00000548645 Q5PR19 223 aa17.55■□□□□ 0.4
NPAS3-206ENST00000548645 KLHL30-AS1Q8NEE0 82 aa17.55■□□□□ 0.4
NPAS3-206ENST00000548645 NDUFA11Q86Y39 141 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms