RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TMEM241Q24JQ0 296 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 CENPWQ5EE01 88 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 TMEM69Q5SWH9 247 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 SPATA31B1PQ5VZV4 182 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 TMEM136Q6ZRR5 245 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 FAM19A3Q7Z5A8 133 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 DAZ4Q86SG3 579 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 TTC9CQ8N5M4 171 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 OR10J5Q8NHC4 309 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 VSTM2AQ8TAG5 236 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 GINS4Q9BRT9 223 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 DAZ1Q9NQZ3 744 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 MRPL27Q9P0M9 148 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 C14orf166Q9Y224 244 aaKnown RBP2.07□□□□□ -2.08
PTCH1-216ENST00000548379 PRELID3BQ9Y3B1 194 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 ALG5Q9Y673 324 aa2.07□□□□□ -2.08
PTCH1-216ENST00000548379 HEATR1Q9H583 2144 aaKnown RBP2.06□□□□□ -2.08
PTCH1-216ENST00000548379 TRAV10A0A0B4J240 114 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 A8MWP6 167 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 K7EPK0 472 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 CRYZL1O95825 349 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 IFNA10P01566 189 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 PRH1P02810 166 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 TCRBP04435 133 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 HIST1H1EP10412 219 aaKnown RBP2.06□□□□□ -2.08
PTCH1-216ENST00000548379 CD36P16671 472 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 CRHBPP24387 322 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 HSPA13P48723 471 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 GTF2A1P52655 376 aaPredicted RBP2.06□□□□□ -2.08
PTCH1-216ENST00000548379 H2BFSP57053 126 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 IL15RAQ13261 267 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 CDK10Q15131 360 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 C6orf201Q7Z4U5 140 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 UBE2DNLQ8IWF7 75 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 OR8A1Q8NGG7 326 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 OR1P1Q8NH06 330 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 OR11H2Q8NH07 326 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 CMSS1Q9BQ75 279 aaKnown RBP2.06□□□□□ -2.08
PTCH1-216ENST00000548379 OR2D2Q9H210 308 aa2.06□□□□□ -2.08
PTCH1-216ENST00000548379 C11orf68Q9H3H3 251 aaKnown RBP2.06□□□□□ -2.08
PTCH1-216ENST00000548379 ARHGAP32A7KAX9 2087 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 DNAH1Q9P2D7 4330 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 DNAH9Q9NYC9 4486 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 TEX50A0A1B0GTY4 177 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 PNMA8CA0A1B0GUJ8 204 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 M0R2N4 97 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 ISLRO14498 428 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 RGS5O15539 181 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 CXorf1O96002 111 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 NAPSAO96009 420 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 HRASP01112 189 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 SAA1P0DJI8 122 aaPredicted RBP2.05□□□□□ -2.08
PTCH1-216ENST00000548379 INAFM2P0DMQ5 153 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 MIFP14174 115 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 CXCL2P19875 107 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 CXCL3P19876 107 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 GADD45AP24522 165 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 RPL27AP46776 148 aaKnown RBP2.05□□□□□ -2.08
PTCH1-216ENST00000548379 TCL1AP56279 114 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 RAB2AP61019 212 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 DAD1P61803 113 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 FLI1Q01543 452 aaPredicted RBP2.05□□□□□ -2.08
PTCH1-216ENST00000548379 SCGB1D4Q6XE38 83 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 IDO2Q6ZQW0 420 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 COMMD7Q86VX2 200 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 ZFP82Q8N141 532 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 C1orf64Q8NEQ6 169 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 C9orf16Q9BUW7 83 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 COMMD5Q9GZQ3 224 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 SLC2A9Q9NRM0 540 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 AK3Q9UIJ7 227 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 APLNQ9ULZ1 77 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 DYNC2H1Q8NCM8 4307 aaKnown RBP2.05□□□□□ -2.08
PTCH1-216ENST00000548379 PLXNB1O43157 2135 aa2.05□□□□□ -2.08
PTCH1-216ENST00000548379 IGKV3-7A0A075B6H7 116 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 DEFB131BA0A096LNP1 70 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 LOC100130705A0A1B0GUX0 176 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 EFCAB10A6NFE3 127 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 OR2T8A6NH00 312 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 NDUFA4O00483 81 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 DEFB4AO15263 64 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 ATP5G1P05496 136 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 CTSDP07339 412 aaPredicted RBP2.04□□□□□ -2.08
PTCH1-216ENST00000548379 PFN1P07737 140 aaKnown RBP2.04□□□□□ -2.08
PTCH1-216ENST00000548379 HLA-DMBP28068 263 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 INPP1P49441 399 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 EIF2B2P49770 351 aaKnown RBP2.04□□□□□ -2.08
PTCH1-216ENST00000548379 SULT1A2P50226 295 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 ARPC4P59998 168 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 RPS11P62280 158 aaKnown RBP eCLIP2.04□□□□□ -2.08
PTCH1-216ENST00000548379 LGALS9BQ3B8N2 356 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 HSD17B12Q53GQ0 312 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 Q56UQ5 140 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 C1orf134Q5TEV5 83 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 C1orf195Q5TG92 126 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 XAF1Q6GPH4 301 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 OR10K2Q6IF99 312 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 Q6ZRU5 148 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 LINC00304Q8N9R0 145 aa2.04□□□□□ -2.08
PTCH1-216ENST00000548379 ZNRF2Q8NHG8 242 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms