RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PSCAO43653 123 aa13.75□□□□□ -0.21
SSH1-207ENST00000547862 UPK1BO75841 260 aa13.75□□□□□ -0.21
SSH1-207ENST00000547862 TYMSP04818 313 aa13.75□□□□□ -0.21
SSH1-207ENST00000547862 SSNA1O43805 119 aa13.74□□□□□ -0.21
SSH1-207ENST00000547862 SMR3BP02814 79 aaPredicted RBP13.74□□□□□ -0.21
SSH1-207ENST00000547862 FAM74A1Q5RGS3 127 aa13.74□□□□□ -0.21
SSH1-207ENST00000547862 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
SSH1-207ENST00000547862 MBD2Q9UBB5 411 aa13.74□□□□□ -0.21
SSH1-207ENST00000547862 TRAV21A0A0B4J279 112 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 MPC2O95563 127 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 PET100P0DJ07 73 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 GCSHP23434 173 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 RPL12P30050 165 aaKnown RBP13.73□□□□□ -0.21
SSH1-207ENST00000547862 RAB2AP61019 212 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 C10orf126Q8N4M7 172 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 SGK494Q96LW2 274 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 Q9HAA7 133 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 TREM1Q9NP99 234 aa13.73□□□□□ -0.21
SSH1-207ENST00000547862 TDRG1Q3Y452 100 aa13.72□□□□□ -0.21
SSH1-207ENST00000547862 TMED6Q8WW62 240 aa13.72□□□□□ -0.21
SSH1-207ENST00000547862 TVP23CQ96ET8 276 aa13.72□□□□□ -0.21
SSH1-207ENST00000547862 VPS13BQ7Z7G8 4022 aa13.71□□□□□ -0.21
SSH1-207ENST00000547862 IGLV5-52A0A0A0MRZ9 124 aa13.71□□□□□ -0.21
SSH1-207ENST00000547862 A0A1W2PPV4 95 aa13.71□□□□□ -0.21
SSH1-207ENST00000547862 IFITM3Q01628 133 aa13.71□□□□□ -0.21
SSH1-207ENST00000547862 ACOT6Q3I5F7 207 aaPredicted RBP13.71□□□□□ -0.21
SSH1-207ENST00000547862 IGHV3-73A0A0B4J1V6 119 aa13.7□□□□□ -0.22
SSH1-207ENST00000547862 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
SSH1-207ENST00000547862 FBLL1A6NHQ2 334 aaKnown RBP13.7□□□□□ -0.22
SSH1-207ENST00000547862 K7EP13 123 aa13.7□□□□□ -0.22
SSH1-207ENST00000547862 GATA1P15976 413 aaPredicted RBP13.7□□□□□ -0.22
SSH1-207ENST00000547862 ASB13Q8WXK3 278 aa13.7□□□□□ -0.22
SSH1-207ENST00000547862 WFDC1Q9HC57 220 aa13.7□□□□□ -0.22
SSH1-207ENST00000547862 IGHV3-30P01768 117 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 IGHV3-33P01772 117 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 IGHV3-30-3P0DP02 117 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 IGHV3-30-5P0DP03 117 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 OR10J3Q5JRS4 329 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 PQLC2Q6ZP29 291 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 NDFIP1Q9BT67 221 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 FAT1Q14517 4588 aa13.69□□□□□ -0.22
SSH1-207ENST00000547862 DMBT1Q9UGM3 2413 aaPredicted RBP13.69□□□□□ -0.22
SSH1-207ENST00000547862 ARL14EPLP0DKL9 152 aa13.68□□□□□ -0.22
SSH1-207ENST00000547862 SH2D6Q7Z4S9 175 aa13.68□□□□□ -0.22
SSH1-207ENST00000547862 KCNS1Q96KK3 526 aa13.68□□□□□ -0.22
SSH1-207ENST00000547862 LINC00299Q6ZSB3 139 aa13.67□□□□□ -0.22
SSH1-207ENST00000547862 HERC1Q15751 4861 aa13.67□□□□□ -0.22
SSH1-207ENST00000547862 TRAV8-6A0A0B4J262 113 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 ZNF876PQ49A33 203 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 LINC01556Q5JQF7 62 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 TMEM75Q8N9X5 138 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 OR10G9Q8NGN4 311 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 OR10G7Q8NGN6 311 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 PRADC1Q9BSG0 188 aa13.66□□□□□ -0.22
SSH1-207ENST00000547862 CDC34P49427 236 aaPredicted RBP13.65□□□□□ -0.22
SSH1-207ENST00000547862 ZNF80P51504 273 aaPredicted RBP13.65□□□□□ -0.22
SSH1-207ENST00000547862 RHOHQ15669 191 aa13.65□□□□□ -0.22
SSH1-207ENST00000547862 DPPA3Q6W0C5 159 aa13.65□□□□□ -0.22
SSH1-207ENST00000547862 MARVELD1Q9BSK0 173 aa13.65□□□□□ -0.22
SSH1-207ENST00000547862 LRCOL1A6NCL2 159 aa13.64□□□□□ -0.23
SSH1-207ENST00000547862 GCGP01275 180 aa13.64□□□□□ -0.23
SSH1-207ENST00000547862 CFAP126Q5VTH2 177 aa13.64□□□□□ -0.23
SSH1-207ENST00000547862 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
SSH1-207ENST00000547862 FLG2Q5D862 2391 aaPredicted RBP13.63□□□□□ -0.23
SSH1-207ENST00000547862 PFN1P07737 140 aaKnown RBP13.63□□□□□ -0.23
SSH1-207ENST00000547862 TIRAPP58753 221 aa13.63□□□□□ -0.23
SSH1-207ENST00000547862 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
SSH1-207ENST00000547862 IBA57-AS1B1ANH7 110 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 FAM229AH3BQW9 127 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 RS1O15537 224 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 ZFP69Q49AA0 526 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 ZNF506Q5JVG8 444 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 Q6ZSN1 163 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 PRNTQ86SH4 94 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 Q8N3U1 123 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 Q8N814 137 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 C5orf17Q8NAS9 161 aa13.62□□□□□ -0.23
SSH1-207ENST00000547862 NTN5Q8WTR8 489 aaPredicted RBP13.62□□□□□ -0.23
SSH1-207ENST00000547862 PGPEP1LA6NFU8 196 aa13.61□□□□□ -0.23
SSH1-207ENST00000547862 TCRAP04437 139 aa13.61□□□□□ -0.23
SSH1-207ENST00000547862 DEFA1P59665 94 aa13.61□□□□□ -0.23
SSH1-207ENST00000547862 DEFA3P59666 94 aa13.61□□□□□ -0.23
SSH1-207ENST00000547862 ARL6IP6Q8N6S5 226 aa13.61□□□□□ -0.23
SSH1-207ENST00000547862 PSG8Q9UQ74 426 aa13.61□□□□□ -0.23
SSH1-207ENST00000547862 TRBV6-4A0A1B0GX49 114 aa13.6□□□□□ -0.23
SSH1-207ENST00000547862 K7EQM0 130 aa13.6□□□□□ -0.23
SSH1-207ENST00000547862 GCHFRP30047 84 aa13.6□□□□□ -0.23
SSH1-207ENST00000547862 LELP1Q5T871 98 aa13.6□□□□□ -0.23
SSH1-207ENST00000547862 C9orf85Q96MD7 179 aa13.6□□□□□ -0.23
SSH1-207ENST00000547862 TMEM70Q9BUB7 260 aa13.6□□□□□ -0.23
SSH1-207ENST00000547862 MYCBP2O75592 4640 aa13.59□□□□□ -0.23
SSH1-207ENST00000547862 SERTM2A0A1B0GWG4 89 aa13.59□□□□□ -0.23
SSH1-207ENST00000547862 TAAR5O14804 337 aa13.59□□□□□ -0.23
SSH1-207ENST00000547862 STAG3L2P0CL84 134 aa13.59□□□□□ -0.23
SSH1-207ENST00000547862 STAG3L3P0CL85 134 aa13.59□□□□□ -0.23
SSH1-207ENST00000547862 FLI1Q01543 452 aaPredicted RBP13.59□□□□□ -0.23
SSH1-207ENST00000547862 ATP6V0E2Q8NHE4 81 aa13.59□□□□□ -0.23
SSH1-207ENST00000547862 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
SSH1-207ENST00000547862 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms