RNA–Protein interactions for RNA: ENST00000547314.5

TGFBR1-204, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-204ENST00000547314 Q6ZQT7 251 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 SPTSSAQ969W0 71 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 RETNLBQ9BQ08 111 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 CXCL16Q9H2A7 254 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 PRO0461Q9UI25 63 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 KIF14Q15058 1648 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 RPRD2Q5VT52 1461 aaKnown RBP2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 PRXQ9BXM0 1461 aa2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 TOP2AP11388 1531 aaKnown RBP2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 SUPT6HQ7KZ85 1726 aaKnown RBP2.88□□□□□ -1.95
TGFBR1-204ENST00000547314 SETBP1Q9Y6X0 1596 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 RIC1Q4ADV7 1423 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 IGKV1D-37A0A075B6S9 117 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 IGKV1OR2-108A0A075B7D4 117 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 A0A1W2PQD3 144 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 J3QLW9 94 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 CREBL2O60519 120 aaPredicted RBP2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 CCKP06307 115 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 NFYAP23511 347 aaPredicted RBP2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 FAUP35544 74 aaKnown RBP2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 XCL1P47992 114 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 ETDBQ3ZM63 59 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 FAM229BQ4G0N7 80 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 Q8N814 137 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 MUC7Q8TAX7 377 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 FAM213BQ8TBF2 198 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 C16orf74Q96GX8 76 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 CYSTM1Q9H1C7 97 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 NDUFB11Q9NX14 153 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 NYNRINQ9P2P1 1898 aaKnown RBP2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 NACAE9PAV3 2078 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 CUX1P39880 1505 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 DISP1Q96F81 1524 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 SCN11AQ9UI33 1791 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 CFAP74Q9C0B2 1584 aa2.87□□□□□ -1.95
TGFBR1-204ENST00000547314 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 DOCK2Q92608 1830 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 PTPN23Q9H3S7 1636 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 USP54Q70EL1 1684 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 ATP10BO94823 1461 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 IGKV1D-17A0A075B6S4 117 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 IGKV2D-26A0A0A0MRZ7 120 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 IGHV3-73A0A0B4J1V6 119 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 IGHV1-24A0A0C4DH33 117 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 A0A1W2PP18 115 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 ATOX1O00244 68 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 MSMBP08118 114 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 PIRTP0C851 137 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 RPS10P46783 165 aaKnown RBP2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 CCL8P80075 99 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 COMMD6Q7Z4G1 85 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 FAM19A2Q8N3H0 131 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 C14orf178Q8N769 122 aaPredicted RBP2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 LINC01560Q8TB33 94 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 SLC50A1Q9BRV3 221 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 SMDT1Q9H4I9 107 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 CYTL1Q9NRR1 136 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 LINC00474Q9P2X8 69 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 CABIN1Q9Y6J0 2220 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 PATJQ8NI35 1801 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 SHROOM2Q13796 1616 aa2.86□□□□□ -1.95
TGFBR1-204ENST00000547314 GREB1Q4ZG55 1949 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 KIAA1549Q9HCM3 1950 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 GOLGA3Q08378 1498 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 KDM3BQ7LBC6 1761 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 A0A087WXM4 84 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 MUC21A0A140T8X8 626 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 C17orf98A8MV24 154 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 SYS1-DBNDD2H3BUS1 97 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 CPSF4O95639 269 aaKnown RBP2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 ROMO1P60602 79 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 RBM3P98179 157 aaKnown RBP2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 Q1T7F1 81 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 SPATA45Q537H7 98 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 NMSQ5H8A3 153 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 ZNRD1Q9P1U0 126 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 ICOSQ9Y6W8 199 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 THADAQ6YHU6 1953 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 WDR90Q96KV7 1748 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 PEAK1Q9H792 1746 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 NWD2Q9ULI1 1742 aa2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 BLMP54132 1417 aaPredicted RBP2.85□□□□□ -1.95
TGFBR1-204ENST00000547314 PCNX2A6NKB5 2137 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 MEGF6O75095 1541 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.84□□□□□ -1.955e-7■■■■□ 23.8
TGFBR1-204ENST00000547314 RAPGEF6Q8TEU7 1601 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 LYRM1O43325 122 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 ZNF861PO60384 105 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 SIX6O95475 246 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 LHBP01229 141 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 DEFA4P12838 97 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 ZNF22P17026 224 aaPredicted RBP2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 CD24P25063 80 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 RHOHQ15669 191 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 LYZL1Q6UWQ5 148 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 LYZL2Q7Z4W2 148 aa2.84□□□□□ -1.95
TGFBR1-204ENST00000547314 SERP2Q8N6R1 65 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms