RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SPXQ9BT56 116 aa10.26□□□□□ -0.77
DDX54-203ENST00000546869 NDUFS6O75380 124 aaKnown RBP10.25□□□□□ -0.77
DDX54-203ENST00000546869 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
DDX54-203ENST00000546869 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
DDX54-203ENST00000546869 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
DDX54-203ENST00000546869 MLST8Q9BVC4 326 aa10.25□□□□□ -0.77
DDX54-203ENST00000546869 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
DDX54-203ENST00000546869 ATP5G1P05496 136 aa10.24□□□□□ -0.77
DDX54-203ENST00000546869 CRIP1P50238 77 aa10.24□□□□□ -0.77
DDX54-203ENST00000546869 ZNF674Q2M3X9 581 aa10.24□□□□□ -0.77
DDX54-203ENST00000546869 ZC2HC1AQ96GY0 325 aa10.24□□□□□ -0.77
DDX54-203ENST00000546869 MDFICQ9P1T7 246 aa10.24□□□□□ -0.77
DDX54-203ENST00000546869 C11orf21Q9P2W6 132 aa10.24□□□□□ -0.77
DDX54-203ENST00000546869 STARD9Q9P2P6 4700 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 RBFOX3A6NFN3 312 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 GNRH2O43555 120 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 TYMSP04818 313 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
DDX54-203ENST00000546869 FAM162BQ5T6X4 162 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 BAGE2Q86Y30 109 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 RASL10AQ92737 203 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 SMIM12Q96EX1 92 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 APLNQ9ULZ1 77 aa10.23□□□□□ -0.77
DDX54-203ENST00000546869 TENM2Q9NT68 2774 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 IGLL5B9A064 214 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 ZNF506Q5JVG8 444 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 DNLZQ5SXM8 178 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 Q6ZTI0 123 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 PTH2Q96A98 100 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 NAGKQ9UJ70 344 aa10.22□□□□□ -0.77
DDX54-203ENST00000546869 IGHV4-4A0A075B6R2 117 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 GAGE12BA1L429 117 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 TMEM250H0YL14 139 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 GAGE7O76087 117 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 GAGE12FP0CL80 117 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 GAGE12GP0CL81 117 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 GAGE12IP0CL82 117 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 NDUFAF3Q9BU61 184 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
DDX54-203ENST00000546869 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
DDX54-203ENST00000546869 LCE6AA0A183 80 aa10.2□□□□□ -0.78
DDX54-203ENST00000546869 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
DDX54-203ENST00000546869 FAM210AQ96ND0 272 aa10.2□□□□□ -0.78
DDX54-203ENST00000546869 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
DDX54-203ENST00000546869 KRBOX1C9JBD0 128 aa10.19□□□□□ -0.78
DDX54-203ENST00000546869 M0R2P5 195 aa10.19□□□□□ -0.78
DDX54-203ENST00000546869 SH2D1AO60880 128 aa10.19□□□□□ -0.78
DDX54-203ENST00000546869 PIK3CD-AS1Q5SR53 167 aa10.19□□□□□ -0.78
DDX54-203ENST00000546869 ZNF575Q86XF7 245 aa10.19□□□□□ -0.78
DDX54-203ENST00000546869 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
DDX54-203ENST00000546869 DYNC2H1Q8NCM8 4307 aaKnown RBP10.19□□□□□ -0.78
DDX54-203ENST00000546869 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 B4DEV8 164 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 F5H768 121 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 H3BNG1 76 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 ORM1P02763 201 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 RNASE3P12724 160 aaKnown RBP10.18□□□□□ -0.78
DDX54-203ENST00000546869 HTN3P15516 51 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 LGALS9CQ6DKI2 356 aa10.18□□□□□ -0.78
DDX54-203ENST00000546869 C9JCJ5 164 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 CXCL1P09341 107 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 ASIPP42127 132 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 GNG4P50150 75 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 NHLRC2Q8NBF2 726 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 BIN3Q9NQY0 253 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 MRPL16Q9NX20 251 aaKnown RBP10.17□□□□□ -0.78
DDX54-203ENST00000546869 IL36BQ9NZH7 164 aa10.17□□□□□ -0.78
DDX54-203ENST00000546869 TRBV20OR9-2A0A075B6H5 130 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 RAB19A4D1S5 217 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 CIDEAO60543 219 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 HOXA5P20719 270 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 SLAQ13239 276 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 LINC00476Q8WZB0 136 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 EIF5A2Q9GZV4 153 aaKnown RBP10.16□□□□□ -0.78
DDX54-203ENST00000546869 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
DDX54-203ENST00000546869 S100A4P26447 101 aaKnown RBP10.15□□□□□ -0.78
DDX54-203ENST00000546869 TOR2AQ5JU69 321 aa10.15□□□□□ -0.78
DDX54-203ENST00000546869 KMT2CQ8NEZ4 4911 aaKnown RBP10.14□□□□□ -0.79
DDX54-203ENST00000546869 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 MED14OSP0DP75 135 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 OR5I1Q13606 314 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 ZNF876PQ49A33 203 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 POM121L12Q8N7R1 296 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 PARLQ9H300 379 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 SCRT2Q9NQ03 307 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 LY96Q9Y6Y9 160 aa10.14□□□□□ -0.79
DDX54-203ENST00000546869 PLECQ15149 4684 aaKnown RBP10.13□□□□□ -0.79
DDX54-203ENST00000546869 M0R036 132 aa10.13□□□□□ -0.79
DDX54-203ENST00000546869 SRP19P09132 144 aaKnown RBP10.13□□□□□ -0.79
DDX54-203ENST00000546869 ARMS2P0C7Q2 107 aa10.13□□□□□ -0.79
DDX54-203ENST00000546869 FHL2Q14192 279 aa10.13□□□□□ -0.79
DDX54-203ENST00000546869 SSBP4Q9BWG4 385 aaPredicted RBP10.13□□□□□ -0.79
DDX54-203ENST00000546869 TRAV26-1A0A087WT03 109 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms