RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 FMC1Q96HJ9 113 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 DUX5Q96PT3 197 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 ZMAT4Q9H898 229 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 NCOR2Q9Y618 2525 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 TRGV11A0A075B6L2 103 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 RBAKDNA6NC62 111 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 DLX6P56179 175 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 C4orf26Q17RF5 130 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 LYPD2Q6UXB3 125 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 C17orf100A8MU93 164 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 PSMG4Q5JS54 123 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 CEMP1Q6PRD7 247 aaPredicted RBP6.12□□□□□ -1.43
UBR1-202ENST00000546274 LRRC75A-AS1Q8N1F1 130 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 Q9H3A6 140 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 CTSZQ9UBR2 303 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 CSMD1Q96PZ7 3565 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 DCHS2Q6V1P9 2916 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 PMVKQ15126 192 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 EXOC3-AS1Q8N2X6 119 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 LINC00311Q8N616 119 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 C8orf31Q8N9H6 132 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 VKORC1Q9BQB6 163 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 TACC2O95359 2948 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 TMEM178BH3BS89 294 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 ENSAO43768 121 aaKnown RBP6.12□□□□□ -1.43
UBR1-202ENST00000546274 PAX8Q06710 450 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 Q86TA4 180 aa6.12□□□□□ -1.43
UBR1-202ENST00000546274 OVOL3O00110 214 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 IGHV4-39P01824 125 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 LGALS1P09382 135 aaKnown RBP6.11□□□□□ -1.43
UBR1-202ENST00000546274 BEX4Q9NWD9 120 aaPredicted RBP6.11□□□□□ -1.43
UBR1-202ENST00000546274 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 SHISA9B4DS77 424 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 GP9P14770 177 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 LOXP28300 417 aaPredicted RBP6.11□□□□□ -1.43
UBR1-202ENST00000546274 SBSPONQ8IVN8 264 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 BAALCQ8WXS3 180 aa6.11□□□□□ -1.43
UBR1-202ENST00000546274 ATP5LO75964 103 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 GATA1P15976 413 aaPredicted RBP6.1□□□□□ -1.43
UBR1-202ENST00000546274 BSPH1Q075Z2 132 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 PLEKHB2Q96CS7 222 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 KLK15Q9H2R5 256 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 A0A0G2JNJ9 132 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 TIMM23O14925 209 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
UBR1-202ENST00000546274 EFNA4P52798 201 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 NDUFA11Q86Y39 141 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 C3orf22Q8N5N4 141 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 MYOZ3Q8TDC0 251 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 Q9UFV3 132 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 CRYGBP07316 175 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 CNTFRP26992 372 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 UBE2D1P51668 147 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 SUB1P53999 127 aaKnown RBP eCLIP6.1□□□□□ -1.43
UBR1-202ENST00000546274 HCP5Q6MZN7 132 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 GAGE2AQ6NT46 116 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 DUX3Q96PT4 197 aa6.1□□□□□ -1.43
UBR1-202ENST00000546274 CD3EP07766 207 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 KLHL30-AS1Q8NEE0 82 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 MALRD1Q5VYJ5 2156 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 IGHV3-72A0A0B4J1Y9 119 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 ZNF785A8K8V0 405 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 IGHV1-8P0DP01 117 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 DLX1P56177 255 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 CCL17Q92583 94 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 SPTBN2O15020 2390 aa6.09□□□□□ -1.43
UBR1-202ENST00000546274 IGHV3-21A0A0B4J1V1 117 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 IGLV2-11P01706 119 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 IGHG4P01861 327 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 APELAP0DMC3 54 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 Q1RN00 199 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 KIR2DL5BQ8NHK3 375 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 C1orf43Q9BWL3 253 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 MSRB1Q9NZV6 116 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 LINC00527Q9UJ94 153 aa6.09□□□□□ -1.44
UBR1-202ENST00000546274 ANKRD11Q6UB99 2663 aaPredicted RBP6.08□□□□□ -1.44
UBR1-202ENST00000546274 NDUFB3O43676 98 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 VMA21Q3ZAQ7 101 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 LINC00477Q96M19 166 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 KAAG1Q9UBP8 84 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 U3KQK5 164 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 LRBAP50851 2863 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 CEP295Q9C0D2 2601 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 KMT2BQ9UMN6 2715 aaPredicted RBP6.08□□□□□ -1.44
UBR1-202ENST00000546274 ACACBO00763 2458 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 TEX22C9J3V5 150 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 SLC25A16P16260 332 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 CRIP1P50238 77 aa6.08□□□□□ -1.44
UBR1-202ENST00000546274 ZNF256Q9Y2P7 627 aaPredicted RBP6.08□□□□□ -1.44
UBR1-202ENST00000546274 TRAV41A0A0B4J266 112 aa6.07□□□□□ -1.44
UBR1-202ENST00000546274 H3BMM0 161 aa6.07□□□□□ -1.44
UBR1-202ENST00000546274 ZNF22P17026 224 aaPredicted RBP6.07□□□□□ -1.44
UBR1-202ENST00000546274 HOXB4P17483 251 aaPredicted RBP6.07□□□□□ -1.44
UBR1-202ENST00000546274 PRB3Q04118 309 aaPredicted RBP6.07□□□□□ -1.44
UBR1-202ENST00000546274 ZNF672Q499Z4 452 aaPredicted RBP6.07□□□□□ -1.44
UBR1-202ENST00000546274 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
UBR1-202ENST00000546274 PKIGQ9Y2B9 76 aa6.07□□□□□ -1.44
UBR1-202ENST00000546274 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
UBR1-202ENST00000546274 M0R2P5 195 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms