RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
COPS7A-221ENST00000546229 H2BFSP57053 126 aa8.35□□□□□ -1.07
COPS7A-221ENST00000546229 ASAH1Q13510 395 aa8.35□□□□□ -1.07
COPS7A-221ENST00000546229 FAM159AQ6UWV7 190 aa8.35□□□□□ -1.07
COPS7A-221ENST00000546229 ATP5SQ99766 215 aa8.35□□□□□ -1.07
COPS7A-221ENST00000546229 SLC25A31Q9H0C2 315 aa8.35□□□□□ -1.07
COPS7A-221ENST00000546229 TRAV8-1A0A0A6YYK1 113 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 F6UZH7 168 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 CSN1S1P47710 185 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 Q8N3U1 123 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 SLC25A29Q8N8R3 303 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
COPS7A-221ENST00000546229 FAM240BA0A1B0GVZ2 78 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 C1QBP02746 253 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 KRTAP10-4P60372 401 aaPredicted RBP8.33□□□□□ -1.08
COPS7A-221ENST00000546229 LRRC37A5PQ49AS3 106 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 KHDC3LQ587J8 217 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 FFAR4Q5NUL3 377 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 SH2D6Q7Z4S9 175 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 ARL6IP6Q8N6S5 226 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 C9orf85Q96MD7 179 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 NAGKQ9UJ70 344 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 HSPB11Q9Y547 144 aa8.33□□□□□ -1.08
COPS7A-221ENST00000546229 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
COPS7A-221ENST00000546229 RS1O15537 224 aa8.32□□□□□ -1.08
COPS7A-221ENST00000546229 ZNF80P51504 273 aaPredicted RBP8.32□□□□□ -1.08
COPS7A-221ENST00000546229 IFITM3Q01628 133 aa8.32□□□□□ -1.08
COPS7A-221ENST00000546229 CFAP126Q5VTH2 177 aa8.32□□□□□ -1.08
COPS7A-221ENST00000546229 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
COPS7A-221ENST00000546229 C17orf112F2Z3M2 114 aa8.31□□□□□ -1.08
COPS7A-221ENST00000546229 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
COPS7A-221ENST00000546229 GNG5P63218 68 aa8.31□□□□□ -1.08
COPS7A-221ENST00000546229 LAGE3Q14657 143 aa8.31□□□□□ -1.08
COPS7A-221ENST00000546229 GOLT1AQ6ZVE7 132 aa8.31□□□□□ -1.08
COPS7A-221ENST00000546229 PPP1R1CQ8WVI7 109 aa8.31□□□□□ -1.08
COPS7A-221ENST00000546229 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 PGPA6NDG6 321 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 FBLL1A6NHQ2 334 aaKnown RBP8.3□□□□□ -1.08
COPS7A-221ENST00000546229 IGLV2-11P01706 119 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 RNASE3P12724 160 aaKnown RBP8.3□□□□□ -1.08
COPS7A-221ENST00000546229 PPT1P50897 306 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 LELP1Q5T871 98 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 LINC00299Q6ZSB3 139 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 NHLRC2Q8NBF2 726 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 PTH2Q96A98 100 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 HYLS1Q96M11 299 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 Q9HAA7 133 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 SDF2L1Q9HCN8 221 aa8.3□□□□□ -1.08
COPS7A-221ENST00000546229 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
COPS7A-221ENST00000546229 MPC2O95563 127 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 TAS2R45P59539 299 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 RAB2AP61019 212 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 RHOHQ15669 191 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 ZNF506Q5JVG8 444 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 ASB13Q8WXK3 278 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 TREM1Q9NP99 234 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 Q9UF83 564 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 RPH3ALQ9UNE2 315 aa8.29□□□□□ -1.08
COPS7A-221ENST00000546229 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 PSCAO43653 123 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
COPS7A-221ENST00000546229 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 ZNF876PQ49A33 203 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 UFSP1Q6NVU6 142 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 MZT2BQ6NZ67 158 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 KCNS1Q96KK3 526 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
COPS7A-221ENST00000546229 TRAV8-6A0A0B4J262 113 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 CIDEAO60543 219 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 UPK1BO75841 260 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 CYCSP99999 105 aaKnown RBP8.27□□□□□ -1.09
COPS7A-221ENST00000546229 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 SGK494Q96LW2 274 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 MARVELD1Q9BSK0 173 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 GTSF1LQ9H1H1 148 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
COPS7A-221ENST00000546229 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 GGTLC3B5MD39 225 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 TCRAP04437 139 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 ARL14EPLP0DKL9 152 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 RPL12P30050 165 aaKnown RBP8.26□□□□□ -1.09
COPS7A-221ENST00000546229 CMTM2Q8TAZ6 248 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 ENKURQ8TC29 256 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 LINC00479Q96M42 142 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 PARLQ9H300 379 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
COPS7A-221ENST00000546229 INMT-MINDY4F8WBC2 141 aa8.25□□□□□ -1.09
COPS7A-221ENST00000546229 HMGB3O15347 200 aaKnown RBP8.25□□□□□ -1.09
COPS7A-221ENST00000546229 STAG3L2P0CL84 134 aa8.25□□□□□ -1.09
COPS7A-221ENST00000546229 STAG3L3P0CL85 134 aa8.25□□□□□ -1.09
COPS7A-221ENST00000546229 MGST1P10620 155 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms