RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ORM1P02763 201 aa15.54■□□□□ 0.08
CHD4-214ENST00000545942 ATP6V0CP27449 155 aa15.54■□□□□ 0.08
CHD4-214ENST00000545942 KCNS1Q96KK3 526 aa15.54■□□□□ 0.08
CHD4-214ENST00000545942 NDFIP1Q9BT67 221 aa15.54■□□□□ 0.08
CHD4-214ENST00000545942 SDF2L1Q9HCN8 221 aa15.54■□□□□ 0.08
CHD4-214ENST00000545942 MBP02144 154 aa15.53■□□□□ 0.08
CHD4-214ENST00000545942 TYMSP04818 313 aa15.53■□□□□ 0.08
CHD4-214ENST00000545942 SERF2P84101 59 aa15.53■□□□□ 0.08
CHD4-214ENST00000545942 C5orf17Q8NAS9 161 aa15.53■□□□□ 0.08
CHD4-214ENST00000545942 OR4C5Q8NGB2 326 aa15.53■□□□□ 0.08
CHD4-214ENST00000545942 HSPG2P98160 4391 aa15.52■□□□□ 0.08
CHD4-214ENST00000545942 TCRAP04437 139 aa15.52■□□□□ 0.08
CHD4-214ENST00000545942 GYPEP15421 78 aa15.52■□□□□ 0.08
CHD4-214ENST00000545942 GCHFRP30047 84 aa15.52■□□□□ 0.08
CHD4-214ENST00000545942 Q6ZRN7 208 aaPredicted RBP15.52■□□□□ 0.08
CHD4-214ENST00000545942 SUN5Q8TC36 379 aa15.52■□□□□ 0.08
CHD4-214ENST00000545942 SGK494Q96LW2 274 aa15.52■□□□□ 0.08
CHD4-214ENST00000545942 C9JCJ5 164 aa15.51■□□□□ 0.07
CHD4-214ENST00000545942 K7EQM0 130 aa15.51■□□□□ 0.07
CHD4-214ENST00000545942 KRTAP10-2P60368 255 aa15.51■□□□□ 0.07
CHD4-214ENST00000545942 ASB13Q8WXK3 278 aa15.51■□□□□ 0.07
CHD4-214ENST00000545942 Q5BKY6 102 aa15.5■□□□□ 0.07
CHD4-214ENST00000545942 TXNDC17Q9BRA2 123 aa15.5■□□□□ 0.07
CHD4-214ENST00000545942 TMEM167BQ9NRX6 74 aa15.5■□□□□ 0.07
CHD4-214ENST00000545942 LY96Q9Y6Y9 160 aa15.5■□□□□ 0.07
CHD4-214ENST00000545942 TRAV9-2A0A087WT02 112 aa15.49■□□□□ 0.07
CHD4-214ENST00000545942 CXorf1O96002 111 aa15.49■□□□□ 0.07
CHD4-214ENST00000545942 GIPP09681 153 aaPredicted RBP15.49■□□□□ 0.07
CHD4-214ENST00000545942 KRTAP4-5Q9BYR2 181 aa15.49■□□□□ 0.07
CHD4-214ENST00000545942 ACTR3CQ9C0K3 210 aaPredicted RBP15.49■□□□□ 0.07
CHD4-214ENST00000545942 SH3BGRL3Q9H299 93 aa15.49■□□□□ 0.07
CHD4-214ENST00000545942 TNFSF18Q9UNG2 199 aa15.49■□□□□ 0.07
CHD4-214ENST00000545942 SUMO1P63165 101 aaKnown RBP15.48■□□□□ 0.07
CHD4-214ENST00000545942 INO80EQ8NBZ0 244 aaPredicted RBP15.48■□□□□ 0.07
CHD4-214ENST00000545942 NFE4Q86UQ8 179 aa15.47■□□□□ 0.07
CHD4-214ENST00000545942 MAPKAPK5-AS1Q8N8E1 139 aa15.47■□□□□ 0.07
CHD4-214ENST00000545942 EPDR1Q9UM22 224 aa15.47■□□□□ 0.07
CHD4-214ENST00000545942 PSG8Q9UQ74 426 aa15.47■□□□□ 0.07
CHD4-214ENST00000545942 ABCA13Q86UQ4 5058 aa15.47■□□□□ 0.07
CHD4-214ENST00000545942 GGTLC3B5MD39 225 aa15.46■□□□□ 0.07
CHD4-214ENST00000545942 K7EP13 123 aa15.46■□□□□ 0.07
CHD4-214ENST00000545942 TAAR5O14804 337 aa15.46■□□□□ 0.07
CHD4-214ENST00000545942 ZNF80P51504 273 aaPredicted RBP15.46■□□□□ 0.07
CHD4-214ENST00000545942 FLI1Q01543 452 aaPredicted RBP15.46■□□□□ 0.07
CHD4-214ENST00000545942 WFDC10BQ8IUB3 73 aa15.46■□□□□ 0.07
CHD4-214ENST00000545942 GCGP01275 180 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 IGLV2-11P01706 119 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 PFN1P07737 140 aaKnown RBP15.45■□□□□ 0.06
CHD4-214ENST00000545942 ZNF876PQ49A33 203 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 ZFP69Q49AA0 526 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 SH2D6Q7Z4S9 175 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 CYB561D1Q8N8Q1 229 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 C11orf21Q9P2W6 132 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 TNFRSF18Q9Y5U5 241 aa15.45■□□□□ 0.06
CHD4-214ENST00000545942 FXYD6-FXYD2A0A087WZ82 144 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 BORCS7-ASMTA0A0B4J1R7 106 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 RNF222A6NCQ9 220 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 FBLL1A6NHQ2 334 aaKnown RBP15.44■□□□□ 0.06
CHD4-214ENST00000545942 EREGO14944 169 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 GATA1P15976 413 aaPredicted RBP15.44■□□□□ 0.06
CHD4-214ENST00000545942 EVI2AP22794 236 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 ERVFC1-1P60608 527 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 SMUG1Q53HV7 270 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 RPL7L1Q6DKI1 246 aaKnown RBP15.44■□□□□ 0.06
CHD4-214ENST00000545942 PRNTQ86SH4 94 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 TMEM75Q8N9X5 138 aa15.44■□□□□ 0.06
CHD4-214ENST00000545942 LOC100131303A0A0U1RQF7 123 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 A0A1W2PRE2 83 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 DNAH10OSP0CZ25 163 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 CIDEAO60543 219 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 SAPCD1Q5SSQ6 148 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 NHLRC2Q8NBF2 726 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 PGPEP1Q9NXJ5 209 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 MSRB1Q9NZV6 116 aa15.43■□□□□ 0.06
CHD4-214ENST00000545942 CFAP126Q5VTH2 177 aa15.42■□□□□ 0.06
CHD4-214ENST00000545942 OR2T35Q8NGX2 323 aa15.42■□□□□ 0.06
CHD4-214ENST00000545942 C9orf85Q96MD7 179 aa15.42■□□□□ 0.06
CHD4-214ENST00000545942 TIRAPP58753 221 aa15.41■□□□□ 0.06
CHD4-214ENST00000545942 SLC25A29Q8N8R3 303 aa15.41■□□□□ 0.06
CHD4-214ENST00000545942 APOBP04114 4563 aaKnown RBP15.4■□□□□ 0.06
CHD4-214ENST00000545942 DNAH5Q8TE73 4624 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 CTXND1A0A1B0GTU2 59 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 RS1O15537 224 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 PPT1P50897 306 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 ZNF726P1Q15940 193 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 DPPA3Q6W0C5 159 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 C10orf126Q8N4M7 172 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 PTH2Q96A98 100 aa15.4■□□□□ 0.06
CHD4-214ENST00000545942 TRBV6-4A0A1B0GX49 114 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 CRYGDP07320 174 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 RHOHQ15669 191 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 CDPF1Q6NVV7 123 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 Q8N1X5 172 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 LINC00479Q96M42 142 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 PRADC1Q9BSG0 188 aa15.39■□□□□ 0.05
CHD4-214ENST00000545942 IFNA7P01567 189 aa15.38■□□□□ 0.05
CHD4-214ENST00000545942 RNASE3P12724 160 aaKnown RBP15.38■□□□□ 0.05
CHD4-214ENST00000545942 ZNF506Q5JVG8 444 aa15.38■□□□□ 0.05
CHD4-214ENST00000545942 ARL2-SNX15V9GYD0 113 aa15.38■□□□□ 0.05
CHD4-214ENST00000545942 A0A087WTM6 91 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms