RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 SPATA25Q9BR10 227 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 DPH3P1Q9H4G8 78 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 LRBAP50851 2863 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 IGHV3-66A0A0C4DH42 116 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 CIDEAO60543 219 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 PPP1R17O96001 155 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 AJUBAQ96IF1 538 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 SCGB3A1Q96QR1 104 aa6.68□□□□□ -1.34
TDP1-204ENST00000545686 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 LINC01549A6NIU2 74 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 A6NJY4 79 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 WFDC2Q14508 124 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 GAGE13Q4V321 117 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 C16orf92Q96LL3 132 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 TTC28Q96AY4 2481 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 TRAV21A0A0B4J279 112 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 GAGE12HA6NDE8 117 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 FAM223BA6NKX1 122 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 K7ENP7 123 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 ZFP36P26651 326 aaKnown RBP6.67□□□□□ -1.34
TDP1-204ENST00000545686 FAM223AQ8IWN6 122 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 RASL10AQ92737 203 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 PRO0461Q9UI25 63 aa6.67□□□□□ -1.34
TDP1-204ENST00000545686 H3BMG7 143 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 OVOL1O14753 267 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 AZU1P20160 251 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 ATP5G2Q06055 141 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 PRR9Q5T870 116 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 TSSC4Q9Y5U2 329 aaPredicted RBP6.66□□□□□ -1.34
TDP1-204ENST00000545686 TRBV7-9A0A0J9YWB2 115 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 CCL21O00585 134 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 LGALS1P09382 135 aaKnown RBP6.66□□□□□ -1.34
TDP1-204ENST00000545686 ASIPP42127 132 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 CRIP2P52943 208 aaPredicted RBP6.66□□□□□ -1.34
TDP1-204ENST00000545686 RPL32P62910 135 aaKnown RBP6.66□□□□□ -1.34
TDP1-204ENST00000545686 ZFAND2AQ8N6M9 145 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 ATP6V0E2Q8NHE4 81 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 BAALCQ8WXS3 180 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
TDP1-204ENST00000545686 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
TDP1-204ENST00000545686 IGHV3OR16-13A0A075B7E8 117 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 IGHV3-74A0A0B4J1X5 117 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 IGHV1-69DA0A0B4J2H0 117 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 G3V318 75 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 SAA4P35542 130 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 C2orf66Q6UXQ4 117 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 POM121L12Q8N7R1 296 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 C5orf56Q8N8D9 126 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 OR10J6PQ8NGY7 276 aa6.65□□□□□ -1.34
TDP1-204ENST00000545686 TLN1Q9Y490 2541 aaKnown RBP6.65□□□□□ -1.35
TDP1-204ENST00000545686 RNF223E7ERA6 249 aa6.65□□□□□ -1.35
TDP1-204ENST00000545686 HOXA3O43365 443 aaPredicted RBP6.65□□□□□ -1.35
TDP1-204ENST00000545686 TCF15Q12870 199 aa6.65□□□□□ -1.35
TDP1-204ENST00000545686 C19orf54Q5BKX5 351 aa6.65□□□□□ -1.35
TDP1-204ENST00000545686 PAPPA-AS1Q5QFB9 102 aa6.65□□□□□ -1.35
TDP1-204ENST00000545686 MORN3Q6PF18 240 aaPredicted RBP6.65□□□□□ -1.35
TDP1-204ENST00000545686 PRADC1Q9BSG0 188 aa6.65□□□□□ -1.35
TDP1-204ENST00000545686 PHLDA3Q9Y5J5 127 aa6.65□□□□□ -1.35
TDP1-204ENST00000545686 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 SOCS3O14543 225 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 NXPH4O95158 308 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 COX6B1P14854 86 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 S100A4P26447 101 aaKnown RBP6.64□□□□□ -1.35
TDP1-204ENST00000545686 ETDBQ3ZM63 59 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 Q6ZQT7 251 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 FAM19A4Q96LR4 140 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 SPAG8Q99932 426 aaPredicted RBP6.64□□□□□ -1.35
TDP1-204ENST00000545686 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 GVINP1Q7Z2Y8 2422 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 UBE2D1P51668 147 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 ADORA2A-AS1P86434 159 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 SCGB2A2Q13296 93 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 RPL39LQ96EH5 51 aaKnown RBP6.64□□□□□ -1.35
TDP1-204ENST00000545686 CYSLTR1Q9Y271 337 aa6.64□□□□□ -1.35
TDP1-204ENST00000545686 TRAV41A0A0B4J266 112 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 ZNF815PA8K554 130 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 NDUFA4O00483 81 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 NPFFO15130 113 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 GPHB5Q86YW7 130 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 DLX4Q92988 240 aaPredicted RBP6.63□□□□□ -1.35
TDP1-204ENST00000545686 KLK15Q9H2R5 256 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 MOB4Q9Y3A3 225 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 MUC4Q99102 2169 aa6.63□□□□□ -1.35
TDP1-204ENST00000545686 LINC01548A6NM66 108 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 NDUFS8O00217 210 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 BRI3O95415 125 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 ARL3P36405 182 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 HERVK_113P61574 105 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 AMTNQ6UX39 209 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
TDP1-204ENST00000545686 C14orf178Q8N769 122 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms