RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 DYNC1H1Q14204 4646 aaKnown RBP13.63□□□□□ -0.23
CHD4-213ENST00000545584 TRAV4A0A0B4J268 109 aa13.63□□□□□ -0.23
CHD4-213ENST00000545584 IGHV3-16A0A0C4DH30 117 aa13.63□□□□□ -0.23
CHD4-213ENST00000545584 GCHFRP30047 84 aa13.63□□□□□ -0.23
CHD4-213ENST00000545584 LINC00315P59091 139 aa13.63□□□□□ -0.23
CHD4-213ENST00000545584 INO80EQ8NBZ0 244 aaPredicted RBP13.63□□□□□ -0.23
CHD4-213ENST00000545584 OR4C5Q8NGB2 326 aa13.63□□□□□ -0.23
CHD4-213ENST00000545584 TVP23CQ96ET8 276 aa13.63□□□□□ -0.23
CHD4-213ENST00000545584 TYMSP04818 313 aa13.62□□□□□ -0.23
CHD4-213ENST00000545584 GYPEP15421 78 aa13.62□□□□□ -0.23
CHD4-213ENST00000545584 SGK494Q96LW2 274 aa13.62□□□□□ -0.23
CHD4-213ENST00000545584 ACTR3CQ9C0K3 210 aaPredicted RBP13.62□□□□□ -0.23
CHD4-213ENST00000545584 TMEM167BQ9NRX6 74 aa13.62□□□□□ -0.23
CHD4-213ENST00000545584 TRAV9-2A0A087WT02 112 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 C9JCJ5 164 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 K7EQD1 137 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 CXorf1O96002 111 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 TCRAP04437 139 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 GIPP09681 153 aaPredicted RBP13.61□□□□□ -0.23
CHD4-213ENST00000545584 TXNDC17Q9BRA2 123 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 TNFSF18Q9UNG2 199 aa13.61□□□□□ -0.23
CHD4-213ENST00000545584 BORCS7-ASMTA0A0B4J1R7 106 aa13.6□□□□□ -0.23
CHD4-213ENST00000545584 CDK2AP2O75956 126 aa13.6□□□□□ -0.23
CHD4-213ENST00000545584 ZFP69Q49AA0 526 aa13.6□□□□□ -0.23
CHD4-213ENST00000545584 SUN5Q8TC36 379 aa13.6□□□□□ -0.23
CHD4-213ENST00000545584 SUMO1P63165 101 aaKnown RBP13.59□□□□□ -0.23
CHD4-213ENST00000545584 Q5BKY6 102 aa13.59□□□□□ -0.23
CHD4-213ENST00000545584 SH3BGRL3Q9H299 93 aa13.59□□□□□ -0.23
CHD4-213ENST00000545584 PSG8Q9UQ74 426 aa13.59□□□□□ -0.23
CHD4-213ENST00000545584 LY96Q9Y6Y9 160 aa13.59□□□□□ -0.23
CHD4-213ENST00000545584 FXYD6-FXYD2A0A087WZ82 144 aa13.58□□□□□ -0.24
CHD4-213ENST00000545584 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
CHD4-213ENST00000545584 TAAR5O14804 337 aa13.58□□□□□ -0.24
CHD4-213ENST00000545584 NFE4Q86UQ8 179 aa13.58□□□□□ -0.24
CHD4-213ENST00000545584 EPDR1Q9UM22 224 aa13.58□□□□□ -0.24
CHD4-213ENST00000545584 EREGO14944 169 aa13.57□□□□□ -0.24
CHD4-213ENST00000545584 GCGP01275 180 aa13.57□□□□□ -0.24
CHD4-213ENST00000545584 FLI1Q01543 452 aaPredicted RBP13.57□□□□□ -0.24
CHD4-213ENST00000545584 SMUG1Q53HV7 270 aa13.57□□□□□ -0.24
CHD4-213ENST00000545584 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
CHD4-213ENST00000545584 CYB561D1Q8N8Q1 229 aa13.57□□□□□ -0.24
CHD4-213ENST00000545584 K7EP13 123 aa13.56□□□□□ -0.24
CHD4-213ENST00000545584 PFN1P07737 140 aaKnown RBP13.56□□□□□ -0.24
CHD4-213ENST00000545584 EVI2AP22794 236 aa13.56□□□□□ -0.24
CHD4-213ENST00000545584 RPL7L1Q6DKI1 246 aaKnown RBP13.56□□□□□ -0.24
CHD4-213ENST00000545584 Q6ZRN7 208 aaPredicted RBP13.56□□□□□ -0.24
CHD4-213ENST00000545584 PRNTQ86SH4 94 aa13.56□□□□□ -0.24
CHD4-213ENST00000545584 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
CHD4-213ENST00000545584 KRTAP10-2P60368 255 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 ZNF876PQ49A33 203 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 SAPCD1Q5SSQ6 148 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 TMEM75Q8N9X5 138 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 OR2T35Q8NGX2 323 aa13.55□□□□□ -0.24
CHD4-213ENST00000545584 RNF222A6NCQ9 220 aa13.54□□□□□ -0.24
CHD4-213ENST00000545584 CIDEAO60543 219 aa13.54□□□□□ -0.24
CHD4-213ENST00000545584 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
CHD4-213ENST00000545584 WFDC10BQ8IUB3 73 aa13.54□□□□□ -0.24
CHD4-213ENST00000545584 NHLRC2Q8NBF2 726 aa13.54□□□□□ -0.24
CHD4-213ENST00000545584 CTXND1A0A1B0GTU2 59 aa13.53□□□□□ -0.24
CHD4-213ENST00000545584 IGLV2-11P01706 119 aa13.53□□□□□ -0.24
CHD4-213ENST00000545584 GATA1P15976 413 aaPredicted RBP13.53□□□□□ -0.24
CHD4-213ENST00000545584 PPT1P50897 306 aa13.53□□□□□ -0.24
CHD4-213ENST00000545584 RGS21Q2M5E4 152 aa13.53□□□□□ -0.24
CHD4-213ENST00000545584 MAPKAPK5-AS1Q8N8E1 139 aa13.53□□□□□ -0.24
CHD4-213ENST00000545584 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 IFNA7P01567 189 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 AKR1C8PQ5T2L2 129 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 PRADC1Q9BSG0 188 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 MSRB1Q9NZV6 116 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 C11orf21Q9P2W6 132 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 TNFRSF18Q9Y5U5 241 aa13.52□□□□□ -0.25
CHD4-213ENST00000545584 RS1O15537 224 aa13.51□□□□□ -0.25
CHD4-213ENST00000545584 DNAH10OSP0CZ25 163 aa13.51□□□□□ -0.25
CHD4-213ENST00000545584 C10orf126Q8N4M7 172 aa13.51□□□□□ -0.25
CHD4-213ENST00000545584 C9orf85Q96MD7 179 aa13.51□□□□□ -0.25
CHD4-213ENST00000545584 PGPEP1Q9NXJ5 209 aa13.51□□□□□ -0.25
CHD4-213ENST00000545584 TIRAPP58753 221 aa13.5□□□□□ -0.25
CHD4-213ENST00000545584 RHOHQ15669 191 aa13.5□□□□□ -0.25
CHD4-213ENST00000545584 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
CHD4-213ENST00000545584 NKX6-2Q9C056 277 aaPredicted RBP13.5□□□□□ -0.25
CHD4-213ENST00000545584 TRAV34A0A0B4J273 112 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 TRBV6-4A0A1B0GX49 114 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 CRYGDP07320 174 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 S100A4P26447 101 aaKnown RBP13.49□□□□□ -0.25
CHD4-213ENST00000545584 UBE2G2P60604 165 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 ZNF726P1Q15940 193 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 PTH2Q96A98 100 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 KRTAP4-5Q9BYR2 181 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
CHD4-213ENST00000545584 ZNF506Q5JVG8 444 aa13.48□□□□□ -0.25
CHD4-213ENST00000545584 LINC00479Q96M42 142 aa13.48□□□□□ -0.25
CHD4-213ENST00000545584 ARL2-SNX15V9GYD0 113 aa13.48□□□□□ -0.25
CHD4-213ENST00000545584 PCLOQ9Y6V0 5065 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 IGHV3-73A0A0B4J1V6 119 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 TRAV8-6A0A0B4J262 113 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 IGHV3-38A0A0C4DH36 116 aa13.47□□□□□ -0.25
CHD4-213ENST00000545584 PGPEP1LA6NFU8 196 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms