RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 BLCAPP62952 87 aa11.49□□□□□ -0.57
USP28-214ENST00000545540 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
USP28-214ENST00000545540 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
USP28-214ENST00000545540 HHLA3Q9XRX5 114 aa11.49□□□□□ -0.57
USP28-214ENST00000545540 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 RPS20P60866 119 aaKnown RBP11.48□□□□□ -0.57
USP28-214ENST00000545540 PPP1R14DQ9NXH3 145 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 GNRH2O43555 120 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 MAPKAPK5-AS1Q8N8E1 139 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 EEF1AKMT3Q96AZ1 226 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 C2CD3Q4AC94 2353 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 FBN2P35556 2912 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 IGKV3-20P01619 116 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 MGPP08493 103 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 EMP1P54849 157 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 TMEM95Q3KNT9 176 aa11.48□□□□□ -0.57
USP28-214ENST00000545540 WNK1Q9H4A3 2382 aa11.47□□□□□ -0.57
USP28-214ENST00000545540 S100A4P26447 101 aaKnown RBP11.47□□□□□ -0.57
USP28-214ENST00000545540 RNASE4P34096 147 aaKnown RBP11.47□□□□□ -0.57
USP28-214ENST00000545540 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
USP28-214ENST00000545540 C5orf56Q8N8D9 126 aa11.47□□□□□ -0.57
USP28-214ENST00000545540 IGSF10Q6WRI0 2623 aa11.47□□□□□ -0.57
USP28-214ENST00000545540 ARL3P36405 182 aa11.47□□□□□ -0.57
USP28-214ENST00000545540 NHP2Q9NX24 153 aaKnown RBP11.47□□□□□ -0.57
USP28-214ENST00000545540 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
USP28-214ENST00000545540 IGKCP01834 107 aa11.46□□□□□ -0.57
USP28-214ENST00000545540 SFTA2Q6UW10 78 aa11.46□□□□□ -0.57
USP28-214ENST00000545540 NRGNQ92686 78 aa11.46□□□□□ -0.57
USP28-214ENST00000545540 MEGF9Q9H1U4 602 aa11.46□□□□□ -0.57
USP28-214ENST00000545540 PF4V1P10720 104 aa11.46□□□□□ -0.58
USP28-214ENST00000545540 GNLYP22749 145 aa11.45□□□□□ -0.58
USP28-214ENST00000545540 C1orf122Q6ZSJ8 110 aa11.45□□□□□ -0.58
USP28-214ENST00000545540 JPT2Q9H910 190 aa11.45□□□□□ -0.58
USP28-214ENST00000545540 A6NDN8 102 aa11.45□□□□□ -0.58
USP28-214ENST00000545540 C9orf118A6NHY6 69 aa11.45□□□□□ -0.58
USP28-214ENST00000545540 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 CDKN1BP46527 198 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 SEC11AP67812 179 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 NRACQ8N912 160 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 IGHV4-39P01824 125 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 HSD52Q0P140 79 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 SMIM15Q7Z3B0 74 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
USP28-214ENST00000545540 CCDC168Q8NDH2 2452 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 NF1P21359 2839 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 COX8CQ7Z4L0 72 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 SPOCK3Q9BQ16 436 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 SLC50A1Q9BRV3 221 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 SPCS1Q9Y6A9 102 aa11.44□□□□□ -0.58
USP28-214ENST00000545540 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 C10orf99Q6UWK7 81 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 GPHB5Q86YW7 130 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 PIFOQ8TCI5 191 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 MYOZ3Q8TDC0 251 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 IGLV2-18A0A075B6J9 118 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 H3BUX3 64 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 ANXA2RQ3ZCQ2 193 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 OR1N2Q8NGR9 330 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 EPG5Q9HCE0 2579 aa11.43□□□□□ -0.58
USP28-214ENST00000545540 PPBPP02775 128 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 LAGE3Q14657 143 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 Q8N8P6 123 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 HIST2H2BDQ6DRA6 164 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
USP28-214ENST00000545540 NIPBLQ6KC79 2804 aaeCLIP11.42□□□□□ -0.58
USP28-214ENST00000545540 MUC4Q99102 2169 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 TEX15Q9BXT5 2789 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 DPM2O94777 84 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
USP28-214ENST00000545540 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
USP28-214ENST00000545540 H3BRM9 83 aa11.41□□□□□ -0.58
USP28-214ENST00000545540 RPL24P83731 157 aaKnown RBP11.41□□□□□ -0.58
USP28-214ENST00000545540 AMTNQ6UX39 209 aa11.41□□□□□ -0.58
USP28-214ENST00000545540 PHLDA3Q9Y5J5 127 aa11.41□□□□□ -0.58
USP28-214ENST00000545540 DPF1Q92782 380 aa11.41□□□□□ -0.58
USP28-214ENST00000545540 OR9G4Q8NGQ1 327 aa11.41□□□□□ -0.58
USP28-214ENST00000545540 A0A087WWL8 130 aa11.4□□□□□ -0.58
USP28-214ENST00000545540 TRBV7-1A0A0A6YYK4 115 aa11.4□□□□□ -0.58
USP28-214ENST00000545540 SAMD5Q5TGI4 173 aa11.4□□□□□ -0.58
USP28-214ENST00000545540 NAV2Q8IVL1 2488 aa11.4□□□□□ -0.58
USP28-214ENST00000545540 DOPEY1Q5JWR5 2465 aa11.4□□□□□ -0.58
USP28-214ENST00000545540 ZFAND2AQ8N6M9 145 aa11.4□□□□□ -0.59
USP28-214ENST00000545540 ZNF462Q96JM2 2506 aa11.39□□□□□ -0.59
USP28-214ENST00000545540 A0A1W2PPM0 123 aa11.39□□□□□ -0.59
USP28-214ENST00000545540 SMIM13P0DJ93 91 aa11.39□□□□□ -0.59
USP28-214ENST00000545540 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
USP28-214ENST00000545540 ITLN2Q8WWU7 325 aaPredicted RBP11.39□□□□□ -0.59
USP28-214ENST00000545540 DUX5Q96PT3 197 aa11.39□□□□□ -0.59
USP28-214ENST00000545540 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
USP28-214ENST00000545540 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
USP28-214ENST00000545540 GTF2H5Q6ZYL4 71 aa11.38□□□□□ -0.59
USP28-214ENST00000545540 OR10J6PQ8NGY7 276 aa11.38□□□□□ -0.59
USP28-214ENST00000545540 RASL10AQ92737 203 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms