RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SH3BGRL3Q9H299 93 aa14.43□□□□□ -0.1
SCARB1-210ENST00000545493 TRAV4A0A0B4J268 109 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 GNRH2O43555 120 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 MRPL23Q16540 153 aaKnown RBP14.42□□□□□ -0.1
SCARB1-210ENST00000545493 IQCF2Q8IXL9 164 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 SUN5Q8TC36 379 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 RAB24Q969Q5 203 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 SGK494Q96LW2 274 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 TREM1Q9NP99 234 aa14.42□□□□□ -0.1
SCARB1-210ENST00000545493 GCHFRP30047 84 aa14.41□□□□□ -0.1
SCARB1-210ENST00000545493 GGTLC3B5MD39 225 aa14.4□□□□□ -0.1
SCARB1-210ENST00000545493 TCRAP04437 139 aa14.4□□□□□ -0.1
SCARB1-210ENST00000545493 GYPEP15421 78 aa14.4□□□□□ -0.1
SCARB1-210ENST00000545493 SRIP30626 198 aa14.4□□□□□ -0.1
SCARB1-210ENST00000545493 NEGR1Q7Z3B1 354 aa14.4□□□□□ -0.1
SCARB1-210ENST00000545493 C5orf17Q8NAS9 161 aa14.4□□□□□ -0.1
SCARB1-210ENST00000545493 SERTM2A0A1B0GWG4 89 aa14.39□□□□□ -0.11
SCARB1-210ENST00000545493 RNF222A6NCQ9 220 aa14.39□□□□□ -0.11
SCARB1-210ENST00000545493 M0R2P5 195 aa14.39□□□□□ -0.11
SCARB1-210ENST00000545493 GIPP09681 153 aaPredicted RBP14.39□□□□□ -0.11
SCARB1-210ENST00000545493 ZNF80P51504 273 aaPredicted RBP14.39□□□□□ -0.11
SCARB1-210ENST00000545493 SDF2L1Q9HCN8 221 aa14.39□□□□□ -0.11
SCARB1-210ENST00000545493 DNAH8Q96JB1 4490 aa14.39□□□□□ -0.11
SCARB1-210ENST00000545493 WFDC10BQ8IUB3 73 aa14.38□□□□□ -0.11
SCARB1-210ENST00000545493 PCNPQ8WW12 178 aaKnown RBP14.38□□□□□ -0.11
SCARB1-210ENST00000545493 C11orf21Q9P2W6 132 aa14.38□□□□□ -0.11
SCARB1-210ENST00000545493 IGLV2-11P01706 119 aa14.37□□□□□ -0.11
SCARB1-210ENST00000545493 MBP02144 154 aa14.37□□□□□ -0.11
SCARB1-210ENST00000545493 SERF2P84101 59 aa14.37□□□□□ -0.11
SCARB1-210ENST00000545493 OR4C5Q8NGB2 326 aa14.37□□□□□ -0.11
SCARB1-210ENST00000545493 ASB13Q8WXK3 278 aa14.37□□□□□ -0.11
SCARB1-210ENST00000545493 NDFIP1Q9BT67 221 aa14.37□□□□□ -0.11
SCARB1-210ENST00000545493 LOC100131303A0A0U1RQF7 123 aa14.36□□□□□ -0.11
SCARB1-210ENST00000545493 ORM1P02763 201 aa14.36□□□□□ -0.11
SCARB1-210ENST00000545493 RPL7L1Q6DKI1 246 aaKnown RBP14.36□□□□□ -0.11
SCARB1-210ENST00000545493 TMEM75Q8N9X5 138 aa14.36□□□□□ -0.11
SCARB1-210ENST00000545493 KCNS1Q96KK3 526 aa14.36□□□□□ -0.11
SCARB1-210ENST00000545493 PSG8Q9UQ74 426 aa14.36□□□□□ -0.11
SCARB1-210ENST00000545493 TNFRSF18Q9Y5U5 241 aa14.36□□□□□ -0.11
SCARB1-210ENST00000545493 C9JCJ5 164 aa14.35□□□□□ -0.11
SCARB1-210ENST00000545493 GCGP01275 180 aa14.35□□□□□ -0.11
SCARB1-210ENST00000545493 TMEM167BQ9NRX6 74 aa14.35□□□□□ -0.11
SCARB1-210ENST00000545493 TNFSF18Q9UNG2 199 aa14.35□□□□□ -0.11
SCARB1-210ENST00000545493 FXYD6-FXYD2A0A087WZ82 144 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 G3V3Q6 166 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 CXorf1O96002 111 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 GATA1P15976 413 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-210ENST00000545493 ZNF726P1Q15940 193 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 MAPKAPK5-AS1Q8N8E1 139 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 CYB561D1Q8N8Q1 229 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 ACTR3CQ9C0K3 210 aaPredicted RBP14.34□□□□□ -0.11
SCARB1-210ENST00000545493 LY96Q9Y6Y9 160 aa14.34□□□□□ -0.11
SCARB1-210ENST00000545493 PFN1P07737 140 aaKnown RBP14.33□□□□□ -0.12
SCARB1-210ENST00000545493 SUMO1P63165 101 aaKnown RBP14.33□□□□□ -0.12
SCARB1-210ENST00000545493 FLI1Q01543 452 aaPredicted RBP14.33□□□□□ -0.12
SCARB1-210ENST00000545493 DPPA3Q6W0C5 159 aa14.33□□□□□ -0.12
SCARB1-210ENST00000545493 C9orf85Q96MD7 179 aa14.33□□□□□ -0.12
SCARB1-210ENST00000545493 TXNDC17Q9BRA2 123 aa14.33□□□□□ -0.12
SCARB1-210ENST00000545493 EPDR1Q9UM22 224 aa14.33□□□□□ -0.12
SCARB1-210ENST00000545493 K7EQM0 130 aa14.32□□□□□ -0.12
SCARB1-210ENST00000545493 PRNTQ86SH4 94 aa14.32□□□□□ -0.12
SCARB1-210ENST00000545493 INO80EQ8NBZ0 244 aaPredicted RBP14.32□□□□□ -0.12
SCARB1-210ENST00000545493 DNAH10OSP0CZ25 163 aa14.31□□□□□ -0.12
SCARB1-210ENST00000545493 ZFP69Q49AA0 526 aa14.31□□□□□ -0.12
SCARB1-210ENST00000545493 SMUG1Q53HV7 270 aa14.31□□□□□ -0.12
SCARB1-210ENST00000545493 OR2T35Q8NGX2 323 aa14.31□□□□□ -0.12
SCARB1-210ENST00000545493 A0A1W2PRE2 83 aa14.3□□□□□ -0.12
SCARB1-210ENST00000545493 FBLL1A6NHQ2 334 aaKnown RBP14.3□□□□□ -0.12
SCARB1-210ENST00000545493 RS1O15537 224 aa14.3□□□□□ -0.12
SCARB1-210ENST00000545493 FUSP35637 526 aaKnown RBP eCLIP14.3□□□□□ -0.126e-6■■■□□ 17.3
SCARB1-210ENST00000545493 ERVFC1-1P60608 527 aa14.3□□□□□ -0.12
SCARB1-210ENST00000545493 ZNF876PQ49A33 203 aa14.3□□□□□ -0.12
SCARB1-210ENST00000545493 CFAP126Q5VTH2 177 aa14.3□□□□□ -0.12
SCARB1-210ENST00000545493 CTXND1A0A1B0GTU2 59 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 TAAR5O14804 337 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 RNASE3P12724 160 aaKnown RBP14.29□□□□□ -0.12
SCARB1-210ENST00000545493 ZNF506Q5JVG8 444 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 SLC25A29Q8N8R3 303 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 NHLRC2Q8NBF2 726 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 LINC00479Q96M42 142 aa14.29□□□□□ -0.12
SCARB1-210ENST00000545493 BORCS7-ASMTA0A0B4J1R7 106 aa14.28□□□□□ -0.12
SCARB1-210ENST00000545493 TRAV34A0A0B4J273 112 aa14.28□□□□□ -0.12
SCARB1-210ENST00000545493 ARL2-SNX15V9GYD0 113 aa14.28□□□□□ -0.12
SCARB1-210ENST00000545493 VPS13BQ7Z7G8 4022 aa14.27□□□□□ -0.12
SCARB1-210ENST00000545493 TRAV9-2A0A087WT02 112 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 IGHV3-73A0A0B4J1V6 119 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 PGPEP1LA6NFU8 196 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 EVI2AP22794 236 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 TIRAPP58753 221 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 UBE2G2P60604 165 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 Q86TA4 180 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 MSRB1Q9NZV6 116 aa14.27□□□□□ -0.13
SCARB1-210ENST00000545493 A0A087WTM6 91 aa14.26□□□□□ -0.13
SCARB1-210ENST00000545493 IGKV3D-20A0A0C4DH25 116 aa14.26□□□□□ -0.13
SCARB1-210ENST00000545493 K7EP13 123 aa14.26□□□□□ -0.13
SCARB1-210ENST00000545493 CRYGDP07320 174 aa14.26□□□□□ -0.13
SCARB1-210ENST00000545493 PPT1P50897 306 aa14.26□□□□□ -0.13
SCARB1-210ENST00000545493 FGF8P55075 233 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-210ENST00000545493 RHOHQ15669 191 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms