RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 CACNG7P62955 275 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 PMCHL1Q16048 86 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 TEX43Q6ZNM6 134 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 FA2HQ7L5A8 372 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 ESM1Q9NQ30 184 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
CHFR-224ENST00000545046 DDTP30046 118 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 KLHL30-AS1Q8NEE0 82 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 OR10AG1Q8NH19 301 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 H3BVH4 76 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 PPBPP02775 128 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 BTF3P20290 206 aaKnown RBP12.47□□□□□ -0.41
CHFR-224ENST00000545046 EBLN2Q6P2I7 272 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 Q8N976 141 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
CHFR-224ENST00000545046 IGHV4-4A0A075B6R2 117 aa12.46□□□□□ -0.41
CHFR-224ENST00000545046 LEPROTL1O95214 131 aa12.46□□□□□ -0.41
CHFR-224ENST00000545046 S100A4P26447 101 aaKnown RBP12.46□□□□□ -0.41
CHFR-224ENST00000545046 ASIPP42127 132 aa12.46□□□□□ -0.41
CHFR-224ENST00000545046 ANXA2RQ3ZCQ2 193 aa12.46□□□□□ -0.41
CHFR-224ENST00000545046 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
CHFR-224ENST00000545046 VAMP8Q9BV40 100 aa12.46□□□□□ -0.41
CHFR-224ENST00000545046 A0A0J9YX75 114 aa12.46□□□□□ -0.42
CHFR-224ENST00000545046 LOC389332A0A1B0GUA5 103 aa12.46□□□□□ -0.42
CHFR-224ENST00000545046 LEPP41159 167 aa12.46□□□□□ -0.42
CHFR-224ENST00000545046 TIMM8BQ9Y5J9 83 aaPredicted RBP12.46□□□□□ -0.42
CHFR-224ENST00000545046 ITPR2Q14571 2701 aa12.46□□□□□ -0.42
CHFR-224ENST00000545046 KLLNB2CW77 178 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 IFI27P40305 119 aaPredicted RBP12.45□□□□□ -0.42
CHFR-224ENST00000545046 DEFA6Q01524 100 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 ADAMTSL5Q6ZMM2 481 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 ODF3Q96PU9 254 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 SIGLEC8Q9NYZ4 499 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 LURAP1LQ8IV03 231 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 OR9G4Q8NGQ1 327 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 DUX3Q96PT4 197 aa12.45□□□□□ -0.42
CHFR-224ENST00000545046 SONP18583 2426 aaKnown RBP12.44□□□□□ -0.42
CHFR-224ENST00000545046 NCR2O95944 276 aa12.44□□□□□ -0.42
CHFR-224ENST00000545046 NPYP01303 97 aa12.44□□□□□ -0.42
CHFR-224ENST00000545046 TMEM70Q9BUB7 260 aa12.44□□□□□ -0.42
CHFR-224ENST00000545046 LAMTOR2Q9Y2Q5 125 aa12.44□□□□□ -0.42
CHFR-224ENST00000545046 TCF21O43680 179 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
CHFR-224ENST00000545046 RNASE1P07998 156 aaKnown RBP12.43□□□□□ -0.42
CHFR-224ENST00000545046 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 EVI2AP22794 236 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 KIR2DL5BA0A0G2JN68 375 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 KIR2DL5BA0A0G2JPC4 375 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 KIR2DL5AQ8N109 375 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 ZNF418Q8TF45 676 aaPredicted RBP12.43□□□□□ -0.42
CHFR-224ENST00000545046 DLX4Q92988 240 aaPredicted RBP12.43□□□□□ -0.42
CHFR-224ENST00000545046 HSPB8Q9UJY1 196 aa12.43□□□□□ -0.42
CHFR-224ENST00000545046 MAP1LC3AQ9H492 121 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 TMEM160Q9NX00 188 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 PAM16Q9Y3D7 125 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 UNC79Q9P2D8 2635 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 C7orf71A4D174 169 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 GNRH2O43555 120 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 IGKV3-20P01619 116 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 FOXI2Q6ZQN5 318 aa12.42□□□□□ -0.42
CHFR-224ENST00000545046 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
CHFR-224ENST00000545046 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
CHFR-224ENST00000545046 TSPOP30536 169 aa12.41□□□□□ -0.42
CHFR-224ENST00000545046 DYNLRB2Q8TF09 96 aa12.41□□□□□ -0.42
CHFR-224ENST00000545046 MAP1LC3CQ9BXW4 147 aa12.41□□□□□ -0.42
CHFR-224ENST00000545046 C16orf95Q9H693 158 aa12.41□□□□□ -0.42
CHFR-224ENST00000545046 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
CHFR-224ENST00000545046 TNFRSF6BO95407 300 aa12.4□□□□□ -0.42
CHFR-224ENST00000545046 C20orf144Q9BQM9 153 aa12.4□□□□□ -0.42
CHFR-224ENST00000545046 TRAV2A0A0B4J234 112 aa12.4□□□□□ -0.42
CHFR-224ENST00000545046 M0R381 172 aa12.4□□□□□ -0.42
CHFR-224ENST00000545046 LINC00173Q6ZV60 143 aa12.4□□□□□ -0.42
CHFR-224ENST00000545046 GCN1Q92616 2671 aaKnown RBP12.4□□□□□ -0.42
CHFR-224ENST00000545046 AKAP9Q99996 3911 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 SYS1-DBNDD2H3BUS1 97 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 CD28P10747 220 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 NDUFAF3Q9BU61 184 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 SCRT2Q9NQ03 307 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 C20orf202A1L168 122 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 CRXO43186 299 aaPredicted RBP12.39□□□□□ -0.43
CHFR-224ENST00000545046 CDKN1BP46527 198 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 LINC01006Q8NI28 216 aa12.39□□□□□ -0.43
CHFR-224ENST00000545046 A0A1W2PRX2 142 aa12.38□□□□□ -0.43
CHFR-224ENST00000545046 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
CHFR-224ENST00000545046 RAX2Q96IS3 184 aa12.38□□□□□ -0.43
CHFR-224ENST00000545046 GAS8-AS1O95177 125 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 SPATA45Q537H7 98 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 TMEM61Q8N0U2 210 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 OR2K2Q8NGT1 345 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 C14orf144Q96I85 54 aa12.37□□□□□ -0.43
CHFR-224ENST00000545046 NXT2Q9NPJ8 142 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms