RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 SULT1A1P50225 295 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 RHOBP62745 196 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 HAMPP81172 84 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 DCDP81605 110 aaKnown RBP0.42□□□□□ -2.34
YBX3-214ENST00000544501 KRTAP19-6Q3LI70 58 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 NCMAPQ5T1S8 102 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 C1orf134Q5TEV5 83 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 RPL22L1Q6P5R6 122 aaKnown RBP0.42□□□□□ -2.34
YBX3-214ENST00000544501 ZNF826PQ6ZT77 177 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 MIR17HGQ75NE6 70 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 KRT222Q8N1A0 295 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 OR52R1Q8NGF1 315 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 OR4D11Q8NGI4 311 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 H1FXQ92522 213 aaKnown RBP0.42□□□□□ -2.34
YBX3-214ENST00000544501 C8orf76Q96K31 380 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 UCK1Q9HA47 277 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 PRTFDC1Q9NRG1 225 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 KLK9Q9UKQ9 250 aa0.42□□□□□ -2.34
YBX3-214ENST00000544501 A0A0G2JMM0 328 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 A0A1W2PPB8 328 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 A0A1W2PRS3 328 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 OR4C46A6NHA9 309 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 KIR3DP1A8MWS1 328 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 BUB1B-PAK6H3BSN5 160 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 PIRO00625 290 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 SULT1B1O43704 296 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 DNAL4O96015 105 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 IFNA16P05015 189 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 CTSDP07339 412 aaPredicted RBP0.41□□□□□ -2.34
YBX3-214ENST00000544501 HTR1AP08908 422 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 CXCL8P10145 99 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 HIST1H1TP22492 207 aaPredicted RBP0.41□□□□□ -2.34
YBX3-214ENST00000544501 SPRR2EP22531 72 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 S100A4P26447 101 aaKnown RBP0.41□□□□□ -2.34
YBX3-214ENST00000544501 SPRR2BP35325 72 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 SPRR2AP35326 72 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 SSR2P43308 183 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 TCTAP57738 103 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 CDC42P60953 191 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 RAB4BP61018 213 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 PSME3P61289 254 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 MT1HP80294 61 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 PLGLB1Q02325 96 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 OR2F1Q13607 317 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 CIRBPQ14011 172 aaKnown RBP0.41□□□□□ -2.34
YBX3-214ENST00000544501 RHEBQ15382 184 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 DEFB112Q30KQ8 113 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 PTRHD1Q6GMV3 140 aaKnown RBP0.41□□□□□ -2.34
YBX3-214ENST00000544501 C22orf39Q6P5X5 142 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 Q6ZQT0 140 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 TRAPPC5Q8IUR0 188 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 C20orf196Q8IYI0 205 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 CLECL1Q8IZS7 167 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 HIST3H2BBQ8N257 126 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 LRRC25Q8N386 305 aaPredicted RBP0.41□□□□□ -2.34
YBX3-214ENST00000544501 LINC00311Q8N616 119 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 OTUD6BQ8N6M0 293 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 DEFB108BQ8NET1 73 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 PFN4Q8NHR9 129 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 TOMM6Q96B49 74 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 GPR146Q96CH1 333 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 DCUN1D1Q96GG9 259 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 OBSCN-AS1Q96MR7 158 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 CCDC90BQ9GZT6 254 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 OR51V1Q9H2C8 321 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 C14orf105Q9NVL8 296 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 STOML2Q9UJZ1 356 aa0.41□□□□□ -2.34
YBX3-214ENST00000544501 LOC110117498A0A087WWA1 95 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 TRBV6-8A0A0A6YYG3 113 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CCDC160A6NGH7 325 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 C2orf70A6NJV1 201 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 SMIM23A6NLE4 172 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CLDN24A6NM45 220 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CLDN25C9JDP6 229 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 M0R036 132 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 NIPSNAP2O75323 286 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 OR2B3O76000 313 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CNIH1O95406 144 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 IGF2P01344 180 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CRHP06850 196 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 OR5G3P0C626 314 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 SPRR2DP22532 72 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 SERPINB9P50453 376 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 MYL6P60660 151 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 DEFB110Q30KQ9 67 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 SPANXN5Q5MJ07 72 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CLDN22Q8N7P3 220 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 TERB2Q8NHR7 220 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 LINC00526Q96FQ7 95 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CMSS1Q9BQ75 279 aaKnown RBP0.4□□□□□ -2.35
YBX3-214ENST00000544501 LXNQ9BS40 222 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 PSTPIP2Q9H939 334 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 OSTCQ9NRP0 149 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 ACER3Q9NUN7 267 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 APLNQ9ULZ1 77 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 CYSLTR1Q9Y271 337 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 UTP11Q9Y3A2 253 aaKnown RBP0.4□□□□□ -2.35
YBX3-214ENST00000544501 TMEM56-RWDD3S4R434 201 aa0.4□□□□□ -2.35
YBX3-214ENST00000544501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.39□□□□□ -2.35
YBX3-214ENST00000544501 hCG_1818297A0A087WSY0 165 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms