RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 FHL2Q14192 279 aa9.63□□□□□ -0.87
VAMP1-208ENST00000544432 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
VAMP1-208ENST00000544432 KCNRGQ8N5I3 272 aa9.63□□□□□ -0.87
VAMP1-208ENST00000544432 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
VAMP1-208ENST00000544432 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
VAMP1-208ENST00000544432 HHLA3Q9XRX5 114 aa9.63□□□□□ -0.87
VAMP1-208ENST00000544432 MRPS16Q9Y3D3 137 aaKnown RBP9.63□□□□□ -0.87
VAMP1-208ENST00000544432 M0R2P5 195 aa9.62□□□□□ -0.87
VAMP1-208ENST00000544432 GNRH2O43555 120 aa9.62□□□□□ -0.87
VAMP1-208ENST00000544432 CRYBA4P53673 196 aa9.62□□□□□ -0.87
VAMP1-208ENST00000544432 FLI1Q01543 452 aaPredicted RBP9.62□□□□□ -0.87
VAMP1-208ENST00000544432 SGK494Q96LW2 274 aa9.62□□□□□ -0.87
VAMP1-208ENST00000544432 SDF2L1Q9HCN8 221 aa9.62□□□□□ -0.87
VAMP1-208ENST00000544432 NAGKQ9UJ70 344 aa9.62□□□□□ -0.87
VAMP1-208ENST00000544432 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 A0A0D9SG52 128 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 SMLR1H3BR10 107 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 IGHV3-53P01767 116 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 TYMSP04818 313 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
VAMP1-208ENST00000544432 SMUG1Q53HV7 270 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 ICOSQ9Y6W8 199 aa9.61□□□□□ -0.87
VAMP1-208ENST00000544432 TRGV4A0A0C4DH28 118 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 A0A1W2PPQ1 181 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 FAM74A7A6NL05 159 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 BTF3P20290 206 aaKnown RBP9.6□□□□□ -0.87
VAMP1-208ENST00000544432 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
VAMP1-208ENST00000544432 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
VAMP1-208ENST00000544432 ZFP69Q49AA0 526 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 TTC32Q5I0X7 151 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 PRNTQ86SH4 94 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 C6orf223Q8N319 242 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 OR11H4Q8NGC9 324 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 HIST1H2BAQ96A08 127 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 ZNF479Q96JC4 524 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 C8orf49Q96NF6 230 aa9.6□□□□□ -0.87
VAMP1-208ENST00000544432 DNAH11Q96DT5 4516 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 MAP1LC3B2A6NCE7 125 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 GCGP01275 180 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 SEC11BP0C7V7 166 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 FHITP49789 147 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 PPT1P50897 306 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 STOML3Q8TAV4 291 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 PTH2Q96A98 100 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 TCEAL7Q9BRU2 100 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 MAP1LC3BQ9GZQ8 125 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
VAMP1-208ENST00000544432 UMAD1C9J7I0 102 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 PEX7O00628 323 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 CIDEAO60543 219 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 IFNA7P01567 189 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 ORM1P02763 201 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 FGF8P55075 233 aaPredicted RBP9.58□□□□□ -0.88
VAMP1-208ENST00000544432 UBE2G2P60604 165 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 OR4C5Q8NGB2 326 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 LINC00479Q96M42 142 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
VAMP1-208ENST00000544432 DYNC1H1Q14204 4646 aaKnown RBP9.58□□□□□ -0.88
VAMP1-208ENST00000544432 BCL2L11O43521 198 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 SFTA3P0C7M3 94 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 NEGR1Q7Z3B1 354 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 MBD3L1Q8WWY6 194 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 C9orf85Q96MD7 179 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
VAMP1-208ENST00000544432 TRAV34A0A0B4J273 112 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 TRBV6-1A0A0K0K1D8 114 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 KANTRA0A1W2PQU2 76 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 K7EQD1 137 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 EIF5AP63241 154 aaKnown RBP9.56□□□□□ -0.88
VAMP1-208ENST00000544432 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 DPPA3Q6W0C5 159 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
VAMP1-208ENST00000544432 SRIP30626 198 aa9.55□□□□□ -0.88
VAMP1-208ENST00000544432 ZNF876PQ49A33 203 aa9.55□□□□□ -0.88
VAMP1-208ENST00000544432 PIK3CD-AS1Q5SR53 167 aa9.55□□□□□ -0.88
VAMP1-208ENST00000544432 SH2D6Q7Z4S9 175 aa9.55□□□□□ -0.88
VAMP1-208ENST00000544432 Q86TA4 180 aa9.55□□□□□ -0.88
VAMP1-208ENST00000544432 PCNPQ8WW12 178 aaKnown RBP9.55□□□□□ -0.88
VAMP1-208ENST00000544432 ZNF471Q9BX82 626 aaPredicted RBP9.55□□□□□ -0.88
VAMP1-208ENST00000544432 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
VAMP1-208ENST00000544432 HERC2O95714 4834 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 C9JCJ5 164 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 SIVA1O15304 175 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 RS1O15537 224 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 RNASE3P12724 160 aaKnown RBP9.54□□□□□ -0.88
VAMP1-208ENST00000544432 GYPEP15421 78 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 GATA1P15976 413 aaPredicted RBP9.54□□□□□ -0.88
VAMP1-208ENST00000544432 SFT2D1Q8WV19 159 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 FMC1Q96HJ9 113 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 TXNDC17Q9BRA2 123 aa9.54□□□□□ -0.88
VAMP1-208ENST00000544432 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
VAMP1-208ENST00000544432 NXPH4O95158 308 aa9.53□□□□□ -0.88
VAMP1-208ENST00000544432 TNP2Q05952 138 aa9.53□□□□□ -0.88
VAMP1-208ENST00000544432 LGALSLQ3ZCW2 172 aaPredicted RBP9.53□□□□□ -0.88
VAMP1-208ENST00000544432 DNLZQ5SXM8 178 aa9.53□□□□□ -0.88
VAMP1-208ENST00000544432 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
VAMP1-208ENST00000544432 TMUB2Q71RG4 321 aa9.53□□□□□ -0.88
VAMP1-208ENST00000544432 PGPEP1LA6NFU8 196 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms