RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 WFDC3Q8IUB2 231 aa12.89□□□□□ -0.35
PTPRO-209ENST00000543886 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
PTPRO-209ENST00000543886 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 C20orf202A1L168 122 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 LGALS9O00182 355 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 CKS2P33552 79 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 TFPI2P48307 235 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 TMEM86BQ8N661 226 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 DCANP1Q8TF63 244 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 AP5S1Q9NUS5 200 aa12.88□□□□□ -0.35
PTPRO-209ENST00000543886 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
PTPRO-209ENST00000543886 OR5AL1P0C617 328 aa12.87□□□□□ -0.35
PTPRO-209ENST00000543886 HOXD3P31249 432 aaPredicted RBP12.87□□□□□ -0.35
PTPRO-209ENST00000543886 Q6ZQT7 251 aa12.87□□□□□ -0.35
PTPRO-209ENST00000543886 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
PTPRO-209ENST00000543886 FAM19A4Q96LR4 140 aa12.87□□□□□ -0.35
PTPRO-209ENST00000543886 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
PTPRO-209ENST00000543886 MRPS16Q9Y3D3 137 aaKnown RBP12.87□□□□□ -0.35
PTPRO-209ENST00000543886 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
PTPRO-209ENST00000543886 TMEM70Q9BUB7 260 aa12.86□□□□□ -0.35
PTPRO-209ENST00000543886 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
PTPRO-209ENST00000543886 OR10AG1Q8NH19 301 aa12.85□□□□□ -0.35
PTPRO-209ENST00000543886 LOC389332A0A1B0GUA5 103 aa12.85□□□□□ -0.35
PTPRO-209ENST00000543886 IFI27P40305 119 aaPredicted RBP12.85□□□□□ -0.35
PTPRO-209ENST00000543886 CACNG7P62955 275 aa12.85□□□□□ -0.35
PTPRO-209ENST00000543886 SMIM15Q7Z3B0 74 aa12.85□□□□□ -0.35
PTPRO-209ENST00000543886 STPG4Q8N801 248 aa12.85□□□□□ -0.35
PTPRO-209ENST00000543886 ZNF469Q96JG9 3925 aaPredicted RBP12.85□□□□□ -0.35
PTPRO-209ENST00000543886 TEX15Q9BXT5 2789 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 TRAV9-2A0A087WT02 112 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 H3BVH4 76 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 NCR2O95944 276 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 PPBPP02775 128 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
PTPRO-209ENST00000543886 ORAOV1Q8WV07 137 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 SIGLEC8Q9NYZ4 499 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 HSPB8Q9UJY1 196 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 MXRA5Q9NR99 2828 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 SNAI2O43623 268 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 TSPOP30536 169 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
PTPRO-209ENST00000543886 CCDC168Q8NDH2 2452 aa12.83□□□□□ -0.36
PTPRO-209ENST00000543886 NPYP01303 97 aa12.83□□□□□ -0.36
PTPRO-209ENST00000543886 APRG1Q8IVJ8 170 aa12.83□□□□□ -0.36
PTPRO-209ENST00000543886 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
PTPRO-209ENST00000543886 ITPR3Q14573 2671 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 PSMG4Q5JS54 123 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 LINC00173Q6ZV60 143 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 TCF21O43680 179 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 ASIPP42127 132 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 KHDC1LQ5JSQ8 128 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 ATOH7Q8N100 152 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
PTPRO-209ENST00000543886 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 SYS1-DBNDD2H3BUS1 97 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 K7EQG2 157 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 S100A4P26447 101 aaKnown RBP12.81□□□□□ -0.36
PTPRO-209ENST00000543886 DEFB136Q30KP8 78 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 C18orf65Q6ZTR6 163 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
PTPRO-209ENST00000543886 EVI2AP22794 236 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 SLURP1P55000 103 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 ANXA2RQ3ZCQ2 193 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 C4orf3Q8WVX3 66 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 FOXC2Q99958 501 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 MAP1LC3AQ9H492 121 aa12.81□□□□□ -0.36
PTPRO-209ENST00000543886 LINC01619G3V211 115 aa12.8□□□□□ -0.36
PTPRO-209ENST00000543886 KIR3DS1Q14943 382 aa12.8□□□□□ -0.36
PTPRO-209ENST00000543886 DPF1Q92782 380 aa12.8□□□□□ -0.36
PTPRO-209ENST00000543886 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
PTPRO-209ENST00000543886 TLN2Q9Y4G6 2542 aa12.8□□□□□ -0.36
PTPRO-209ENST00000543886 KLLNB2CW77 178 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 TCTEX1D4Q5JR98 221 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 SPATA12Q7Z6I5 190 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 YAE1D1Q9NRH1 226 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 UNC79Q9P2D8 2635 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 CD5LO43866 347 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 LEPP41159 167 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 HINT1P49773 126 aaPredicted RBP12.79□□□□□ -0.36
PTPRO-209ENST00000543886 MAJINQ3KP22 176 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 Q6ZSV7 163 aa12.79□□□□□ -0.36
PTPRO-209ENST00000543886 GCN1Q92616 2671 aaKnown RBP12.79□□□□□ -0.36
PTPRO-209ENST00000543886 TNFRSF6BO95407 300 aa12.78□□□□□ -0.36
PTPRO-209ENST00000543886 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
PTPRO-209ENST00000543886 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
PTPRO-209ENST00000543886 OR11H1Q8NG94 326 aa12.78□□□□□ -0.36
PTPRO-209ENST00000543886 PDZD2O15018 2839 aa12.78□□□□□ -0.36
PTPRO-209ENST00000543886 PET117Q6UWS5 81 aa12.77□□□□□ -0.36
PTPRO-209ENST00000543886 ODF3Q96PU9 254 aa12.77□□□□□ -0.36
PTPRO-209ENST00000543886 PEMTQ9UBM1 199 aa12.77□□□□□ -0.36
PTPRO-209ENST00000543886 PHLDA3Q9Y5J5 127 aa12.77□□□□□ -0.36
PTPRO-209ENST00000543886 COX11Q9Y6N1 276 aa12.77□□□□□ -0.36
PTPRO-209ENST00000543886 A0A0J9YX75 114 aa12.77□□□□□ -0.37
PTPRO-209ENST00000543886 M0R381 172 aa12.77□□□□□ -0.37
PTPRO-209ENST00000543886 IGLL1P15814 213 aa12.77□□□□□ -0.37
PTPRO-209ENST00000543886 KRTAP1-1Q07627 177 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms