RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PLNP26678 52 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 TMEM258P61165 79 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 BLCAPP62952 87 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 SPRNQ5BIV9 151 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 LINC01551Q86U37 167 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 CYTL1Q9NRR1 136 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 JMJD1CQ15652 2540 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 IGHV1OR15-1A0A075B7D0 117 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 ZNF843Q8N446 348 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 DEFB104AQ8WTQ1 72 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 ZFYVE26Q68DK2 2539 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 TRBV19A0A075B6N1 114 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 WISP2O76076 250 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 IFI27L1Q96BM0 104 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 SS18Q15532 418 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 DYSFO75923 2080 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 K7EP13 123 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 PFN1P07737 140 aaKnown RBP5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 ADMP35318 185 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 GAGE13Q4V321 117 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 LINC00528Q8N1L1 170 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 IL17DQ8TAD2 202 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 LY96Q9Y6Y9 160 aa5.45□□□□□ -1.54
SRGAP1-206ENST00000543397 TRAV12-2A0A075B6T6 113 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 TRAV13-1A0A0B4J241 112 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 A8MWV9 139 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 IGLC1P0CG04 106 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 SMPXQ9UHP9 88 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 ANAPC10Q9UM13 185 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 CEP295Q9C0D2 2601 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 IGKV1-39P01597 117 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 IGKV1D-39P04432 117 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 HRCT1Q6UXD1 115 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 TMEM170AQ8WVE7 144 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 DNAJC30Q96LL9 226 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 JPT2Q9H910 190 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 IGHV3-64A0A075B6Q5 118 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 SRSF3P84103 164 aaKnown RBP5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 KIR3DS1Q14943 382 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 TRAV9-2A0A087WT02 112 aa5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 LOXL1Q08397 574 aaPredicted RBP5.44□□□□□ -1.54
SRGAP1-206ENST00000543397 IGHV3-16A0A0C4DH30 117 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 PRSS57Q6UWY2 283 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 TRPT1Q86TN4 253 aaKnown RBP5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 CHCHD1Q96BP2 118 aaKnown RBP5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 CLPSL1A2RUU4 121 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 H3BRN7 92 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 TMEM75Q8N9X5 138 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 RASL10AQ92737 203 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 LINC00479Q96M42 142 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 TRBV25-1A0A075B6N4 114 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 C19orf84I3L1E1 186 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 CRYGBP07316 175 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 XGP55808 180 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 A0A0A0MQY5 61 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 IGHV7-81A0A0B4J1V7 117 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 ZFP36P26651 326 aaKnown RBP5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 SLURP1P55000 103 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 NUP35Q8NFH5 326 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 ZNF462Q96JM2 2506 aa5.43□□□□□ -1.54
SRGAP1-206ENST00000543397 IGLC7A0M8Q6 106 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 ZNF815PA8K554 130 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 WIPF1O43516 503 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 IGKCP01834 107 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 RBMY1FQ15415 496 aaKnown RBP5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 FOXI2Q6ZQN5 318 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 LY6G5BQ8NDX9 201 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 RMI2Q96E14 147 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 TMEM242Q9NWH2 141 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 TRAV2A0A0B4J234 112 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 PIFOQ8TCI5 191 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 IGFBPL1Q8WX77 278 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 A0A1B0GW64 132 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 PAX4O43316 350 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 AMN1Q8IY45 258 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 PRR14LQ5THK1 2151 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 CD164Q04900 197 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 ZNF491Q8N8L2 437 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 TMEM14CQ9P0S9 112 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 SPCS1Q9Y6A9 102 aa5.42□□□□□ -1.54
SRGAP1-206ENST00000543397 WFDC11Q8NEX6 87 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 FGF23Q9GZV9 251 aaPredicted RBP5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 TRBV24-1A0A075B6N3 115 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 J3QL48 77 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 PRR31Q5SQ13 230 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 NPBQ8NG41 125 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 IGF2BP2-AS1Q96M15 143 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 PRR25Q96S07 402 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 DSCAMO60469 2012 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 CGB3P0DN86 165 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 KRTAP27-1Q3LI81 207 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 PLEKHB2Q96CS7 222 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 PPDPFQ9H3Y8 114 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 COL4A4P53420 1690 aaPredicted RBP5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 FASNP49327 2511 aaKnown RBP5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 ZNRF2Q8NHG8 242 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 AJUBAQ96IF1 538 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 SPTBN4Q9H254 2564 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 C5orf56Q8N8D9 126 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms