RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 ITPR3Q14573 2671 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 C5orf64Q2M2E5 130 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 DPM3Q9P2X0 92 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 H3BMG7 143 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.95□□□□□ -0.66
PRAME-214ENST00000543184 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 ARPC1AQ92747 370 aa10.95□□□□□ -0.66
PRAME-214ENST00000543184 IGKV3D-20A0A0C4DH25 116 aa10.94□□□□□ -0.66
PRAME-214ENST00000543184 DEFB1P60022 68 aa10.94□□□□□ -0.66
PRAME-214ENST00000543184 SMIM17P0DL12 118 aa10.94□□□□□ -0.66
PRAME-214ENST00000543184 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
PRAME-214ENST00000543184 SIVA1O15304 175 aa10.94□□□□□ -0.66
PRAME-214ENST00000543184 FLNAP21333 2647 aaKnown RBP10.94□□□□□ -0.66
PRAME-214ENST00000543184 PDE6HQ13956 83 aa10.94□□□□□ -0.66
PRAME-214ENST00000543184 ECSCRQ19T08 205 aa10.94□□□□□ -0.66
PRAME-214ENST00000543184 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.665e-19■■■□□ 17.5
PRAME-214ENST00000543184 FABP5P3A8MUU1 101 aa10.93□□□□□ -0.66
PRAME-214ENST00000543184 BMI1P35226 326 aa10.93□□□□□ -0.66
PRAME-214ENST00000543184 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
PRAME-214ENST00000543184 PSMG3-AS1Q96PY0 264 aa10.93□□□□□ -0.66
PRAME-214ENST00000543184 IGF1P05019 195 aa10.93□□□□□ -0.66
PRAME-214ENST00000543184 INSL3P51460 131 aa10.93□□□□□ -0.66
PRAME-214ENST00000543184 RAB1BQ9H0U4 201 aa10.93□□□□□ -0.66
PRAME-214ENST00000543184 B9A039 149 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 ETDBQ3ZM63 59 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 TSSC4Q9Y5U2 329 aaPredicted RBP10.92□□□□□ -0.66
PRAME-214ENST00000543184 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 CLEC3BP05452 202 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 AZU1P20160 251 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 CEND1Q8N111 149 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
PRAME-214ENST00000543184 DPM2O94777 84 aa10.91□□□□□ -0.66
PRAME-214ENST00000543184 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
PRAME-214ENST00000543184 MTORP42345 2549 aa10.91□□□□□ -0.66
PRAME-214ENST00000543184 Q5PR19 223 aa10.91□□□□□ -0.66
PRAME-214ENST00000543184 ZMAT4Q9H898 229 aa10.91□□□□□ -0.66
PRAME-214ENST00000543184 SAMD13Q5VXD3 122 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 MAPK1IP1LQ8NDC0 245 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 CCL19Q99731 98 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 LINC00527Q9UJ94 153 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 IGLL5B9A064 214 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 G3V318 75 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 C15orf32Q32M92 178 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 CLEC19AQ6UXS0 136 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 PDZD2O15018 2839 aa10.9□□□□□ -0.66
PRAME-214ENST00000543184 IGLV2-18A0A075B6J9 118 aa10.89□□□□□ -0.67
PRAME-214ENST00000543184 WFDC12Q8WWY7 111 aa10.89□□□□□ -0.67
PRAME-214ENST00000543184 HIST1H4GQ99525 98 aa10.89□□□□□ -0.67
PRAME-214ENST00000543184 H3BVH4 76 aa10.89□□□□□ -0.67
PRAME-214ENST00000543184 NPBQ8NG41 125 aa10.89□□□□□ -0.67
PRAME-214ENST00000543184 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 NXT2Q9NPJ8 142 aaKnown RBP10.88□□□□□ -0.67
PRAME-214ENST00000543184 IGHV7-81A0A0B4J1V7 117 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 ATP5G2Q06055 141 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 C12orf74Q32Q52 190 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 C11orf71Q6IPW1 123 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 RNF5Q99942 180 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 CUBNO60494 3623 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 PRR9Q5T870 116 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 SPANXN1Q5VSR9 72 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 TTC9CQ8N5M4 171 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 Q8N8P6 123 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 MYOZ3Q8TDC0 251 aa10.88□□□□□ -0.67
PRAME-214ENST00000543184 IGKV3-7A0A075B6H7 116 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 EMP1P54849 157 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 VMO1Q7Z5L0 202 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 NRACQ8N912 160 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 AKAP9Q99996 3911 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 M0R381 172 aa10.87□□□□□ -0.67
PRAME-214ENST00000543184 SRSF8Q9BRL6 282 aaKnown RBP10.87□□□□□ -0.67
PRAME-214ENST00000543184 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 BUB3O43684 328 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 ATP5J2P56134 94 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 LAGE3Q14657 143 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 RPL39LQ96EH5 51 aaKnown RBP10.86□□□□□ -0.67
PRAME-214ENST00000543184 SPAG8Q99932 426 aaPredicted RBP10.86□□□□□ -0.67
PRAME-214ENST00000543184 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 OTOGQ6ZRI0 2925 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 COX8CQ7Z4L0 72 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 LY6G5BQ8NDX9 201 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 OR11H6Q8NGC7 330 aa10.86□□□□□ -0.67
PRAME-214ENST00000543184 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
PRAME-214ENST00000543184 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
PRAME-214ENST00000543184 E9PLD3 99 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 ZFP36P26651 326 aaKnown RBP10.85□□□□□ -0.67
PRAME-214ENST00000543184 LINC01559Q495D7 138 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 FOXI2Q6ZQN5 318 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 TM2D2Q9BX73 214 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 HIGD1BQ9P298 99 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 TRAV8-2A0A0B4J237 113 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 CLPSL1A2RUU4 121 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 ATP6V0E1O15342 81 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 CEACAM3P40198 252 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 CNFNQ9BYD5 112 aa10.85□□□□□ -0.67
PRAME-214ENST00000543184 GLMPQ8WWB7 406 aa10.84□□□□□ -0.67
PRAME-214ENST00000543184 BPESC1Q9GZL8 116 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms