RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
XRCC4-206ENST00000542685 H3BVH4 76 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 J3QT63 122 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 K7EMI3 77 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 VCYO14598 125 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 IFI27P40305 119 aaPredicted RBP4.42□□□□□ -1.7
XRCC4-206ENST00000542685 ERVK-16P61578 105 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 LINC01620Q4KN68 170 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 FAM104BQ5XKR9 115 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 C2orf48Q96LS8 159 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 LINC00477Q96M19 166 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 PRO1854Q9UHT4 67 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 HTTP42858 3142 aa4.42□□□□□ -1.7
XRCC4-206ENST00000542685 MYO9BQ13459 2157 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 AGRNO00468 2067 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 IGLV5-45A0A087WSX0 123 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 IGHV1OR15-9A0A0B4J2B8 117 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 A0A0J9YW62 118 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 TRBV30A0A0K0K1B3 111 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 F8VRH5 84 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 SPINT2O43291 252 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 PYYP10082 97 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 LEPP41159 167 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 B3GALT5-AS1P59052 145 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 NPC2P61916 151 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 MZT1Q08AG7 82 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 ZNF56Q15929 161 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 TMEM155Q4W5P6 130 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 Q6ZT83 130 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 SERP2Q8N6R1 65 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 SSMEM1Q8WWF3 244 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 FAM167A-AS1Q96KT0 104 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 PAXXQ9BUH6 204 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 DEFB126Q9BYW3 111 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 FGF23Q9GZV9 251 aaPredicted RBP4.41□□□□□ -1.7
XRCC4-206ENST00000542685 SIRPDQ9H106 197 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 LINC00527Q9UJ94 153 aa4.41□□□□□ -1.7
XRCC4-206ENST00000542685 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 PGPA6NDG6 321 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 H7C1H1 209 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 CDX4O14627 284 aaPredicted RBP4.4□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV4-39P01824 125 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 PATE4P0C8F1 98 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 RPL35AP18077 110 aaKnown RBP4.4□□□□□ -1.71
XRCC4-206ENST00000542685 ZNF137PP52743 207 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 ZNF138P52744 262 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 EFNA4P52798 201 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 ATP5EP56381 51 aaPredicted RBP4.4□□□□□ -1.71
XRCC4-206ENST00000542685 HERVK_113P61574 105 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
XRCC4-206ENST00000542685 ZFP2Q6ZN57 461 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 Q86TA4 180 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 GTSCR1Q86UQ5 136 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 SLC25A45Q8N413 288 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 Q8N8P6 123 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 ITLN1Q8WWA0 313 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 IMMP1LQ96LU5 166 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 METTL26Q96S19 204 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 RPP25Q9BUL9 199 aaKnown RBP4.4□□□□□ -1.71
XRCC4-206ENST00000542685 SRXN1Q9BYN0 137 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 PROK2Q9HC23 129 aa4.4□□□□□ -1.71
XRCC4-206ENST00000542685 RAI1Q7Z5J4 1906 aaPredicted RBP4.4□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV1-45A0A0A0MS14 117 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV3-20A0A0C4DH32 117 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 C15orf61A6NNL5 157 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 D6R8Y8 96 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 INS-IGF2F8WCM5 200 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 UPK2O00526 184 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 BCE1O60756 84 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 SSR4P51571 173 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 SUB1P53999 127 aaKnown RBP eCLIP4.39□□□□□ -1.71
XRCC4-206ENST00000542685 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
XRCC4-206ENST00000542685 VMA21Q3ZAQ7 101 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 C2orf83Q53S99 150 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 FAM201AQ5SY85 155 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 C16orf47Q6ZP98 133 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-206ENST00000542685 IL17RELQ6ZVW7 336 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 DAND5Q8N907 189 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 TMEM75Q8N9X5 138 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 C17orf77Q96MU5 243 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 FOXC2Q99958 501 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 OTORQ9NRC9 128 aa4.39□□□□□ -1.71
XRCC4-206ENST00000542685 TIMM8BQ9Y5J9 83 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-206ENST00000542685 TMSB15BA0A087X1C1 80 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 A0A0U1RRA0 63 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 TMEM30CPA0ZSE6 113 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 MRPS12O15235 138 aaKnown RBP4.38□□□□□ -1.71
XRCC4-206ENST00000542685 COX7A2P2O60397 106 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 SCRG1O75711 98 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 TCRAP04437 139 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 COX6CP09669 75 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 ARMS2P0C7Q2 107 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 CCL3P10147 92 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 LOXP28300 417 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms