RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 EIF4E3Q8N5X7 224 aaKnown RBP8.37□□□□□ -1.07
YBX3-213ENST00000542641 LINC00467Q9BRT7 94 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 IGHV4-28A0A0C4DH34 117 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 DEFB4AO15263 64 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 SH2D1AO60880 128 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 ORM1P02763 201 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 SFTA3P0C7M3 94 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 ANXA2RQ3ZCQ2 193 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 Q8NAQ8 132 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 OCC1Q8TAD7 63 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 U3KQK5 164 aa8.36□□□□□ -1.07
YBX3-213ENST00000542641 A0A0J9YWU9 116 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 TMEM189A5PLL7 270 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 EMP1P54849 157 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 TMEM241Q24JQ0 296 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 TDRG1Q3Y452 100 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 TMEM263Q8WUH6 116 aaKnown RBP8.35□□□□□ -1.07
YBX3-213ENST00000542641 DAZAP1Q96EP5 407 aaKnown RBP8.35□□□□□ -1.07
YBX3-213ENST00000542641 C16orf74Q96GX8 76 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 KCNS1Q96KK3 526 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 SDF2L1Q9HCN8 221 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 BIN3Q9NQY0 253 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 C11orf21Q9P2W6 132 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 TP53TG3Q9ULZ0 132 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 LY96Q9Y6Y9 160 aa8.35□□□□□ -1.07
YBX3-213ENST00000542641 TRGV11A0A075B6L2 103 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 K7EN84 100 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 M0R036 132 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 GNRH2O43555 120 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 OR5I1Q13606 314 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 RNASE8Q8TDE3 154 aaKnown RBP8.34□□□□□ -1.07
YBX3-213ENST00000542641 NAT8Q9UHE5 227 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 COL7A1Q02388 2944 aa8.34□□□□□ -1.07
YBX3-213ENST00000542641 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
YBX3-213ENST00000542641 B4DEV8 164 aa8.33□□□□□ -1.08
YBX3-213ENST00000542641 KRBOX1C9JBD0 128 aa8.33□□□□□ -1.08
YBX3-213ENST00000542641 LINC01551Q86U37 167 aa8.33□□□□□ -1.08
YBX3-213ENST00000542641 C11orf68Q9H3H3 251 aaKnown RBP8.33□□□□□ -1.08
YBX3-213ENST00000542641 GSN-AS1Q9NRJ2 163 aa8.33□□□□□ -1.08
YBX3-213ENST00000542641 TMSB15BA0A087X1C1 80 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 TMEM218A2RU14 115 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 SNURFLB1AK76 121 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 P01737 135 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 TYMSP04818 313 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 IBA57Q5T440 356 aaKnown RBP8.32□□□□□ -1.08
YBX3-213ENST00000542641 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
YBX3-213ENST00000542641 IGHV3-16A0A0C4DH30 117 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 PLAC8L1A1L4L8 177 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 F8W036 122 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
YBX3-213ENST00000542641 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 RPL23P62829 140 aaKnown RBP8.31□□□□□ -1.08
YBX3-213ENST00000542641 RPL19P84098 196 aaKnown RBP8.31□□□□□ -1.08
YBX3-213ENST00000542641 ADIRFQ15847 76 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 NUDT10Q8NFP7 164 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 NUDT11Q96G61 164 aa8.31□□□□□ -1.08
YBX3-213ENST00000542641 RNASE7Q9H1E1 156 aaKnown RBP8.31□□□□□ -1.08
YBX3-213ENST00000542641 NOP10Q9NPE3 64 aaKnown RBP8.31□□□□□ -1.08
YBX3-213ENST00000542641 TIMM8BQ9Y5J9 83 aaPredicted RBP8.31□□□□□ -1.08
YBX3-213ENST00000542641 TENM3Q9P273 2699 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 ASIPP42127 132 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 TCL1AP56279 114 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 OR2D3Q8NGH3 330 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 EDA2RQ9HAV5 297 aa8.3□□□□□ -1.08
YBX3-213ENST00000542641 CXorf65A6NEN9 183 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 LYRM9A8MSI8 78 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
YBX3-213ENST00000542641 RPS20P60866 119 aaKnown RBP8.29□□□□□ -1.08
YBX3-213ENST00000542641 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
YBX3-213ENST00000542641 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 ZNF575Q86XF7 245 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 ISOC2Q96AB3 205 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 SPXQ9BT56 116 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 RPP21Q9H633 154 aaKnown RBP8.29□□□□□ -1.08
YBX3-213ENST00000542641 DKK2Q9UBU2 259 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 CELA1Q9UNI1 258 aa8.29□□□□□ -1.08
YBX3-213ENST00000542641 TEX48A0A1B0GUV7 120 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 XKRY2A2RUG3 117 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
YBX3-213ENST00000542641 ADCYAP1P18509 176 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
YBX3-213ENST00000542641 DNLZQ5SXM8 178 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 SLC7A5P1Q8MH63 180 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 C15orf54Q8N8G6 183 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 IL17DQ8TAD2 202 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 SFRP2Q96HF1 295 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
YBX3-213ENST00000542641 OSTCQ9NRP0 149 aa8.28□□□□□ -1.08
YBX3-213ENST00000542641 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 GAGE12BA1L429 117 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 H3BVH4 76 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms