RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 SRSF9Q13242 221 aaKnown RBP eCLIP7.82□□□□□ -1.16
TOP3A-208ENST00000542570 SCGB3A1Q96QR1 104 aa7.82□□□□□ -1.16
TOP3A-208ENST00000542570 ELANEP08246 267 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 EDN2P20800 178 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 KIR3DS1Q14943 382 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 ZNF124Q15973 351 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 OR10J3Q5JRS4 329 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 C10orf91Q5T1B1 145 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 LINC00322Q6ZN03 302 aaPredicted RBP7.81□□□□□ -1.16
TOP3A-208ENST00000542570 C1orf159Q96HA4 380 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 A0A0U1RRA0 63 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 H7C2G1 150 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 CRYGBP07316 175 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 GTSCR1Q86UQ5 136 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 RAB37Q96AX2 223 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 STAB1Q9NY15 2570 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 TET2Q6N021 2002 aaPredicted RBP7.81□□□□□ -1.16
TOP3A-208ENST00000542570 AGRNO00468 2067 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 CACNG7P62955 275 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 SRSF1Q07955 248 aaKnown RBP eCLIP7.81□□□□□ -1.163e-7■■■□□ 17.9
TOP3A-208ENST00000542570 UNC79Q9P2D8 2635 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
TOP3A-208ENST00000542570 CD28P10747 220 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 Q1RN00 199 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 IGHV3-38A0A0C4DH36 116 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 LGALS1P09382 135 aaKnown RBP7.8□□□□□ -1.16
TOP3A-208ENST00000542570 PKIAP61925 76 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 TMEM61Q8N0U2 210 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
TOP3A-208ENST00000542570 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
TOP3A-208ENST00000542570 A0A096LPF7 62 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
TOP3A-208ENST00000542570 DDTP30046 118 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 TMEM190Q8WZ59 177 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 ESM1Q9NQ30 184 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 NUPR1O60356 82 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 Q6AWC8 147 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 PRM2P04554 102 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 SFTA2Q6UW10 78 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 MRAPQ8TCY5 172 aa7.79□□□□□ -1.16
TOP3A-208ENST00000542570 NPIPB6E9PJ23 425 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 UBE2L6O14933 153 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 DEFB4AO15263 64 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 UBE2CO00762 179 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 NDUFS6O75380 124 aaKnown RBP7.78□□□□□ -1.16
TOP3A-208ENST00000542570 CD300EQ496F6 205 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-208ENST00000542570 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 GCSHP23434 173 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 C1orf194Q5T5A4 169 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 C18orf32Q8TCD1 76 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 ST20Q9HBF5 79 aa7.78□□□□□ -1.16
TOP3A-208ENST00000542570 NBEAL1Q6ZS30 2694 aa7.77□□□□□ -1.16
TOP3A-208ENST00000542570 C3orf79P0CE67 100 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 LY96Q9Y6Y9 160 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 WI2-2373I1.2A0A1W2PRP0 233 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 GAGE12BA1L429 117 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 GAGE7O76087 117 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 GAGE12FP0CL80 117 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 GAGE12GP0CL81 117 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 GAGE12IP0CL82 117 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 MEGF9Q9H1U4 602 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 COL6A5A8TX70 2615 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 M0R143 59 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 LTAP01374 205 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 CDKN1BP46527 198 aa7.77□□□□□ -1.17
TOP3A-208ENST00000542570 ZNF80P51504 273 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-208ENST00000542570 C2orf70A6NJV1 201 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 LY6G6DO95868 133 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 Q6ZQT7 251 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 GTSF1Q8WW33 167 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 CSTL1Q9H114 145 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 MRPL16Q9NX20 251 aaKnown RBP7.76□□□□□ -1.17
TOP3A-208ENST00000542570 IGLC2P0DOY2 106 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 SUMO2P61956 95 aaKnown RBP7.76□□□□□ -1.17
TOP3A-208ENST00000542570 TMEM97Q5BJF2 176 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 Q6ZSV7 163 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 A8MWP6 167 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 SCGB1C2P0DMR2 95 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 TMEM158Q8WZ71 300 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 JPT2Q9H910 190 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 TRAV9-1A0A075B6T8 112 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 MRPL51Q4U2R6 128 aaKnown RBP7.76□□□□□ -1.17
TOP3A-208ENST00000542570 C12orf54Q6X4T0 127 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 VPS25Q9BRG1 176 aa7.76□□□□□ -1.17
TOP3A-208ENST00000542570 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
TOP3A-208ENST00000542570 NPYP01303 97 aa7.75□□□□□ -1.17
TOP3A-208ENST00000542570 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
TOP3A-208ENST00000542570 Q6YL49 198 aa7.75□□□□□ -1.17
TOP3A-208ENST00000542570 IFI27L1Q96BM0 104 aa7.75□□□□□ -1.17
TOP3A-208ENST00000542570 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.75□□□□□ -1.17
TOP3A-208ENST00000542570 RNASE13Q5GAN3 156 aaKnown RBP7.75□□□□□ -1.17
TOP3A-208ENST00000542570 C16orf54Q6UWD8 224 aa7.75□□□□□ -1.17
TOP3A-208ENST00000542570 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
TOP3A-208ENST00000542570 HBDP02042 147 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms