RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 S100A10P60903 97 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 Q6ZQT7 251 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 TXNDC17Q9BRA2 123 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 TNFSF18Q9UNG2 199 aa10.43□□□□□ -0.74
RTN3-211ENST00000542238 IGLV5-52A0A0A0MRZ9 124 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 KANTRA0A1W2PQU2 76 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 PSCAO43653 123 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 SFTA3P0C7M3 94 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 Q6ZSN1 163 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 TMEM252Q8N6L7 170 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 OR10G4Q8NGN3 311 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 SLC25A2Q9BXI2 301 aa10.42□□□□□ -0.74
RTN3-211ENST00000542238 IGSF23A1L1A6 192 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 C9JCJ5 164 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 CSN1S1P47710 185 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 MUC21Q5SSG8 566 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 Q8TAT8 98 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
RTN3-211ENST00000542238 SPXQ9BT56 116 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 TMEM70Q9BUB7 260 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 NPCDR1Q9BY65 106 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 OR51M1Q9H341 326 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 VPS13BQ7Z7G8 4022 aa10.41□□□□□ -0.74
RTN3-211ENST00000542238 RNF222A6NCQ9 220 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 ZNF266Q14584 549 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 GCSAMLQ5JQS6 135 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 UQCC3Q6UW78 93 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 SH2D6Q7Z4S9 175 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.4□□□□□ -0.74
RTN3-211ENST00000542238 RASL10AQ92737 203 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 SLC25A31Q9H0C2 315 aa10.4□□□□□ -0.74
RTN3-211ENST00000542238 MYCBP2O75592 4640 aa10.4□□□□□ -0.75
RTN3-211ENST00000542238 TRGV11A0A075B6L2 103 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 H0YIZ8 118 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 J3QL48 77 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 HAMPP81172 84 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 TMEM183BQ1AE95 376 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 FAM159AQ6UWV7 190 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 MIR17HGQ75NE6 70 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 TMEM183AQ8IXX5 376 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 STOML3Q8TAV4 291 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 PAXXQ9BUH6 204 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 FAT1Q14517 4588 aa10.39□□□□□ -0.75
RTN3-211ENST00000542238 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
RTN3-211ENST00000542238 OR10J4P0C629 311 aa10.38□□□□□ -0.75
RTN3-211ENST00000542238 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
RTN3-211ENST00000542238 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
RTN3-211ENST00000542238 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 IGHV3-38A0A0C4DH36 116 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 RAB19A4D1S5 217 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 TEX46H3BTG2 121 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 PPT1P50897 306 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 Q6AWC8 147 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 NHLRC2Q8NBF2 726 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 FXYD5Q96DB9 178 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 KCNIP2Q9NS61 270 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
RTN3-211ENST00000542238 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
RTN3-211ENST00000542238 OR7C2O60412 319 aa10.36□□□□□ -0.75
RTN3-211ENST00000542238 RANP62826 216 aaKnown RBP10.36□□□□□ -0.75
RTN3-211ENST00000542238 LRRC37A5PQ49AS3 106 aa10.36□□□□□ -0.75
RTN3-211ENST00000542238 AQP10Q96PS8 301 aa10.36□□□□□ -0.75
RTN3-211ENST00000542238 ZNF471Q9BX82 626 aaPredicted RBP10.36□□□□□ -0.75
RTN3-211ENST00000542238 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
RTN3-211ENST00000542238 LENEPQ9Y5L5 61 aa10.36□□□□□ -0.75
RTN3-211ENST00000542238 TIRAPP58753 221 aa10.35□□□□□ -0.75
RTN3-211ENST00000542238 Q8N814 137 aa10.35□□□□□ -0.75
RTN3-211ENST00000542238 INO80EQ8NBZ0 244 aaPredicted RBP10.35□□□□□ -0.75
RTN3-211ENST00000542238 OR5C1Q8NGR4 320 aa10.35□□□□□ -0.75
RTN3-211ENST00000542238 NAGKQ9UJ70 344 aa10.35□□□□□ -0.75
RTN3-211ENST00000542238 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 M0R2P5 195 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 NHLH2Q02577 135 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
RTN3-211ENST00000542238 DIRC3C9JPN6 131 aa10.33□□□□□ -0.76
RTN3-211ENST00000542238 C17orf112F2Z3M2 114 aa10.33□□□□□ -0.76
RTN3-211ENST00000542238 PFN1P07737 140 aaKnown RBP10.33□□□□□ -0.76
RTN3-211ENST00000542238 TPT1P13693 172 aaKnown RBP10.33□□□□□ -0.76
RTN3-211ENST00000542238 RPL12P30050 165 aaKnown RBP10.33□□□□□ -0.76
RTN3-211ENST00000542238 UBE2L3P68036 154 aaKnown RBP10.33□□□□□ -0.76
RTN3-211ENST00000542238 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
RTN3-211ENST00000542238 Q9HAA7 133 aa10.33□□□□□ -0.76
RTN3-211ENST00000542238 APOC3P02656 99 aa10.32□□□□□ -0.76
RTN3-211ENST00000542238 PLA2G1BP04054 148 aaKnown RBP10.32□□□□□ -0.76
RTN3-211ENST00000542238 OR10J3Q5JRS4 329 aa10.32□□□□□ -0.76
RTN3-211ENST00000542238 ATRAIDQ6UW56 229 aa10.32□□□□□ -0.76
RTN3-211ENST00000542238 CLRN3Q8NCR9 226 aa10.32□□□□□ -0.76
RTN3-211ENST00000542238 TMED6Q8WW62 240 aa10.32□□□□□ -0.76
RTN3-211ENST00000542238 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
RTN3-211ENST00000542238 GNRH2O43555 120 aa10.31□□□□□ -0.76
RTN3-211ENST00000542238 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
RTN3-211ENST00000542238 ATP5SQ99766 215 aa10.31□□□□□ -0.76
RTN3-211ENST00000542238 NKX6-2Q9C056 277 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 508.5 ms