RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 AGPAT4-IT1Q9H0P7 198 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 IGF1P05019 195 aa11.8□□□□□ -0.52
CNOT9-208ENST00000542068 HIST1H4GQ99525 98 aa11.8□□□□□ -0.52
CNOT9-208ENST00000542068 WFDC2Q14508 124 aa11.8□□□□□ -0.52
CNOT9-208ENST00000542068 SH2D6Q7Z4S9 175 aa11.8□□□□□ -0.52
CNOT9-208ENST00000542068 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
CNOT9-208ENST00000542068 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
CNOT9-208ENST00000542068 CELSR2Q9HCU4 2923 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 DPF1Q92782 380 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 NOTCH2Q04721 2471 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 H3BMG7 143 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 SMAGPQ0VAQ4 97 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 TMEM78Q5T7P6 136 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 NPBQ8NG41 125 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 SRSF8Q9BRL6 282 aaKnown RBP11.79□□□□□ -0.52
CNOT9-208ENST00000542068 C2CD3Q4AC94 2353 aa11.79□□□□□ -0.52
CNOT9-208ENST00000542068 FBXL19-AS1Q494R0 122 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 Q8N9W7 124 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 SRD5A1P18405 259 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 VPS13CQ709C8 3753 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
CNOT9-208ENST00000542068 SIVA1O15304 175 aa11.77□□□□□ -0.52
CNOT9-208ENST00000542068 MGPP08493 103 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 EMP1P54849 157 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 ODF3BA8MYP8 253 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 SCGB2A2Q13296 93 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 ETDBQ3ZM63 59 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 C11orf71Q6IPW1 123 aa11.77□□□□□ -0.53
CNOT9-208ENST00000542068 CYSLTR1Q9Y271 337 aa11.76□□□□□ -0.53
CNOT9-208ENST00000542068 LAGE3Q14657 143 aa11.76□□□□□ -0.53
CNOT9-208ENST00000542068 CEND1Q8N111 149 aa11.76□□□□□ -0.53
CNOT9-208ENST00000542068 NRGNQ92686 78 aa11.76□□□□□ -0.53
CNOT9-208ENST00000542068 ZNF479Q96JC4 524 aa11.76□□□□□ -0.53
CNOT9-208ENST00000542068 BUB3O43684 328 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
CNOT9-208ENST00000542068 Q8N8P6 123 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 C16orf92Q96LL3 132 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 PF4V1P10720 104 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 ANKRD17O75179 2603 aaKnown RBP11.75□□□□□ -0.53
CNOT9-208ENST00000542068 DOPEY1Q5JWR5 2465 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 CSMD2Q7Z408 3487 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 MAPK1IP1LQ8NDC0 245 aa11.75□□□□□ -0.53
CNOT9-208ENST00000542068 TSSC4Q9Y5U2 329 aaPredicted RBP11.75□□□□□ -0.53
CNOT9-208ENST00000542068 NPFFO15130 113 aa11.74□□□□□ -0.53
CNOT9-208ENST00000542068 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
CNOT9-208ENST00000542068 C14orf178Q8N769 122 aaPredicted RBP11.74□□□□□ -0.53
CNOT9-208ENST00000542068 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
CNOT9-208ENST00000542068 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 METTL26Q96S19 204 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 ATP5LO75964 103 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 IGLL5B9A064 214 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 TGFAP01135 160 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 ATP5J2P56134 94 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 PRR9Q5T870 116 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 SCGB3A1Q96QR1 104 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 SIRPDQ9H106 197 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 MINOS1-NBL1R4GNA1 71 aa11.73□□□□□ -0.53
CNOT9-208ENST00000542068 UBE2E1P51965 193 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 ATP5G2Q06055 141 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 C12orf74Q32Q52 190 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 F6UB75 175 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 AZU1P20160 251 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 ZNF502Q8TBZ5 544 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 IGSF10Q6WRI0 2623 aa11.72□□□□□ -0.53
CNOT9-208ENST00000542068 CCDC140Q96MF4 163 aa11.71□□□□□ -0.53
CNOT9-208ENST00000542068 TRAV8-2A0A0B4J237 113 aa11.71□□□□□ -0.53
CNOT9-208ENST00000542068 INSL3P51460 131 aa11.71□□□□□ -0.53
CNOT9-208ENST00000542068 NRACQ8N912 160 aa11.71□□□□□ -0.53
CNOT9-208ENST00000542068 EEF1AKMT3Q96AZ1 226 aa11.71□□□□□ -0.53
CNOT9-208ENST00000542068 ZFAND3Q9H8U3 227 aa11.71□□□□□ -0.53
CNOT9-208ENST00000542068 MTORP42345 2549 aa11.71□□□□□ -0.54
CNOT9-208ENST00000542068 CENPVL3A0A0U1RRI6 287 aa11.71□□□□□ -0.54
CNOT9-208ENST00000542068 TRBV12-3P01733 135 aa11.71□□□□□ -0.54
CNOT9-208ENST00000542068 SRSF1Q07955 248 aaKnown RBP eCLIP11.7□□□□□ -0.542e-9■■■□□ 16.2
CNOT9-208ENST00000542068 ZMAT4Q9H898 229 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 IGHV4-61A0A0C4DH41 118 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 IGHV7-4-1A0A0J9YVY3 117 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 CLPSL1A2RUU4 121 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 OR11H12B2RN74 326 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 H3BUX3 64 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 LMO4P61968 165 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 SCGB1D4Q6XE38 83 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 OR11H1Q8NG94 326 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 OR11H2Q8NH07 326 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 IGHV4-39P01824 125 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 IGHV4-38-2P0DP08 117 aa11.7□□□□□ -0.54
CNOT9-208ENST00000542068 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
CNOT9-208ENST00000542068 LOC107984156A0A0G2JMH3 177 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms