RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
VTN-203ENST00000542029 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
VTN-203ENST00000542029 LY96Q9Y6Y9 160 aa7.8□□□□□ -1.16
VTN-203ENST00000542029 IGHV3-16A0A0C4DH30 117 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 PTTG1O95997 202 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 SFTA3P0C7M3 94 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 STAG3L2P0CL84 134 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 STAG3L3P0CL85 134 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 GYPEP15421 78 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 EVI2AP22794 236 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 C10orf126Q8N4M7 172 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 MED28Q9H204 178 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 TMEM167BQ9NRX6 74 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 ALG5Q9Y673 324 aa7.79□□□□□ -1.16
VTN-203ENST00000542029 TRAV8-1A0A0A6YYK1 113 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 TAAR5O14804 337 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 GNRH2O43555 120 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 EIF3GO75821 320 aaKnown RBP eCLIP7.78□□□□□ -1.16
VTN-203ENST00000542029 ARL14EPLP0DKL9 152 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 TIRAPP58753 221 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 Q6ZRN7 208 aaPredicted RBP7.78□□□□□ -1.16
VTN-203ENST00000542029 HSD17B11Q8NBQ5 300 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 SUN5Q8TC36 379 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 RAB24Q969Q5 203 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 HSPG2P98160 4391 aa7.78□□□□□ -1.16
VTN-203ENST00000542029 F6UZH7 168 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 HMGB3O15347 200 aaKnown RBP7.77□□□□□ -1.17
VTN-203ENST00000542029 CXorf1O96002 111 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 TCRAP04437 139 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 TYMSP04818 313 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 GIPP09681 153 aaPredicted RBP7.77□□□□□ -1.17
VTN-203ENST00000542029 ATP6V0CP27449 155 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 GCHFRP30047 84 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 KRTAP10-2P60368 255 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 ZFP69Q49AA0 526 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 INO80EQ8NBZ0 244 aaPredicted RBP7.77□□□□□ -1.17
VTN-203ENST00000542029 TVP23CQ96ET8 276 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 ACTR3CQ9C0K3 210 aaPredicted RBP7.77□□□□□ -1.17
VTN-203ENST00000542029 DNAH5Q8TE73 4624 aa7.77□□□□□ -1.17
VTN-203ENST00000542029 PFN1P07737 140 aaKnown RBP7.76□□□□□ -1.17
VTN-203ENST00000542029 DNAH10OSP0CZ25 163 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 GATA1P15976 413 aaPredicted RBP7.76□□□□□ -1.17
VTN-203ENST00000542029 GNG5P63218 68 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 SMUG1Q53HV7 270 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 PRADC1Q9BSG0 188 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 EPDR1Q9UM22 224 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
VTN-203ENST00000542029 BORCS7-ASMTA0A0B4J1R7 106 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 A0A1W2PRE2 83 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 SUMO1P63165 101 aaKnown RBP7.75□□□□□ -1.17
VTN-203ENST00000542029 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
VTN-203ENST00000542029 ZNF876PQ49A33 203 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 Q8N1X5 172 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 NHLRC2Q8NBF2 726 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 PTH2Q96A98 100 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 NKX6-2Q9C056 277 aaPredicted RBP7.75□□□□□ -1.17
VTN-203ENST00000542029 SH3BGRL3Q9H299 93 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 MSRB1Q9NZV6 116 aa7.75□□□□□ -1.17
VTN-203ENST00000542029 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 GCGP01275 180 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 CRYGDP07320 174 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 PPT1P50897 306 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 RHOHQ15669 191 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 WFDC10BQ8IUB3 73 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 TMEM75Q8N9X5 138 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 SGK494Q96LW2 274 aa7.74□□□□□ -1.17
VTN-203ENST00000542029 TRAV8-6A0A0B4J262 113 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 RS1O15537 224 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 PIK3CD-AS1Q5SR53 167 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
VTN-203ENST00000542029 A0A087WTM6 91 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 FXYD6-FXYD2A0A087WZ82 144 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 CTXND1A0A1B0GTU2 59 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 GGTLC3B5MD39 225 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 IGLV2-11P01706 119 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 MGST1P10620 155 aaKnown RBP7.72□□□□□ -1.17
VTN-203ENST00000542029 ZNF80P51504 273 aaPredicted RBP7.72□□□□□ -1.17
VTN-203ENST00000542029 LINC01556Q5JQF7 62 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 CFAP126Q5VTH2 177 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 SLC25A29Q8N8R3 303 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 SCRT2Q9NQ03 307 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 TNFRSF18Q9Y5U5 241 aa7.72□□□□□ -1.17
VTN-203ENST00000542029 RNF222A6NCQ9 220 aa7.71□□□□□ -1.18
VTN-203ENST00000542029 FABP5P3A8MUU1 101 aa7.71□□□□□ -1.18
VTN-203ENST00000542029 IFNA7P01567 189 aa7.71□□□□□ -1.18
VTN-203ENST00000542029 S100A4P26447 101 aaKnown RBP7.71□□□□□ -1.18
VTN-203ENST00000542029 Q5BKY6 102 aa7.71□□□□□ -1.18
VTN-203ENST00000542029 AKR1C8PQ5T2L2 129 aa7.71□□□□□ -1.18
VTN-203ENST00000542029 RPL7L1Q6DKI1 246 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms