RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 PTTG1IPP53801 180 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 C20orf78Q9BR46 151 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 DAZ1Q9NQZ3 744 aaKnown RBP7.49□□□□□ -1.21
LMO3-227ENST00000541764 HIGD1BQ9P298 99 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 LINC00527Q9UJ94 153 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 TIMM8BQ9Y5J9 83 aaPredicted RBP7.49□□□□□ -1.21
LMO3-227ENST00000541764 RELNP78509 3460 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 ABCA2Q9BZC7 2435 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 K7EP13 123 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 PPP1R17O96001 155 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 RPL32P62910 135 aaKnown RBP7.49□□□□□ -1.21
LMO3-227ENST00000541764 BLCAPP62952 87 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 SRSF1Q07955 248 aaKnown RBP eCLIP7.49□□□□□ -1.21
LMO3-227ENST00000541764 HSD52Q0P140 79 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 LAGE3Q14657 143 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 TMEM158Q8WZ71 300 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 ODF3Q96PU9 254 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 RHPN1-AS1Q9BWJ2 59 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 KLK15Q9H2R5 256 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 TP73-AS1Q9UF72 201 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 HHLA3Q9XRX5 114 aa7.49□□□□□ -1.21
LMO3-227ENST00000541764 MED13LQ71F56 2210 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 A1L4Q6 167 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 A6NJY4 79 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 KLLNB2CW77 178 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 SMIM17P0DL12 118 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 PF4V1P10720 104 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 GATA1P15976 413 aaPredicted RBP7.48□□□□□ -1.21
LMO3-227ENST00000541764 PSMB8P28062 276 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 ASIPP42127 132 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 LY6EQ16553 131 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 ADAMTSL5Q6ZMM2 481 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 DKK2Q9UBU2 259 aa7.48□□□□□ -1.21
LMO3-227ENST00000541764 PEF1Q9UBV8 284 aaKnown RBP7.48□□□□□ -1.21
LMO3-227ENST00000541764 A0A096LNT2 108 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 TRAV12-1A0A0B4J245 112 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 H3BVH4 76 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 IGKCP01834 107 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 ID1P41134 155 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 MYOZ3Q8TDC0 251 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 SMIM2Q9BVW6 85 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 UFC1Q9Y3C8 167 aa7.47□□□□□ -1.21
LMO3-227ENST00000541764 A6NDN8 102 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 LINC01549A6NIU2 74 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 H3BRM9 83 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 DPM2O94777 84 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 FXYD7P58549 80 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 ANXA2RQ3ZCQ2 193 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 RNF152Q8N8N0 203 aa7.46□□□□□ -1.22
LMO3-227ENST00000541764 CACNA1BQ00975 2339 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 IGHV4OR15-8A0A075B7B6 117 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 A0A087WW49 117 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 A0A087WX48 190 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 CBY3A6NI87 242 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 IGHV3-11P01762 117 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 PRSS1P07477 247 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 RNASE3P12724 160 aaKnown RBP7.45□□□□□ -1.22
LMO3-227ENST00000541764 SUMO2P61956 95 aaKnown RBP7.45□□□□□ -1.22
LMO3-227ENST00000541764 Q6ZQT7 251 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 Q6ZS46 218 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 Q6ZVH6 145 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 Q8N3U1 123 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 DCANP1Q8TF63 244 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 RASL10AQ92737 203 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 TOMM6Q96B49 74 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 SPTBN4Q9H254 2564 aa7.45□□□□□ -1.22
LMO3-227ENST00000541764 LGALS9O00182 355 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 FSHBP01225 129 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 S100A4P26447 101 aaKnown RBP7.44□□□□□ -1.22
LMO3-227ENST00000541764 PLNP26678 52 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 VAMP3Q15836 100 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 TM4SF20Q53R12 229 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 C18orf15Q96N68 181 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 AP1S3Q96PC3 154 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 FOXC2Q99958 501 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 PHLDA3Q9Y5J5 127 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
LMO3-227ENST00000541764 C7orf71A4D174 169 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 C9orf118A6NHY6 69 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 RNASE4P34096 147 aaKnown RBP7.43□□□□□ -1.22
LMO3-227ENST00000541764 LINC00528Q8N1L1 170 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 LINC01619G3V211 115 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
LMO3-227ENST00000541764 ELANEP08246 267 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 LINC00315P59091 139 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 DEFB112Q30KQ8 113 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 PCP2Q8IVA1 136 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 OR4C5Q8NGB2 326 aa7.43□□□□□ -1.22
LMO3-227ENST00000541764 NCOR2Q9Y618 2525 aa7.42□□□□□ -1.22
LMO3-227ENST00000541764 F8VRH5 84 aa7.42□□□□□ -1.22
LMO3-227ENST00000541764 H7C1H1 209 aa7.42□□□□□ -1.22
LMO3-227ENST00000541764 NMUP48645 174 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms