RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SCN10AQ9Y5Y9 1956 aa2.85□□□□□ -1.95
YBX3-210ENST00000540975 GREB1Q4ZG55 1949 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 SMIM26A0A096LP01 95 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 PGPA6NDG6 321 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 NDUFC2-KCTD14E9PQ53 114 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 TCRAP04437 139 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 OPRM1P35372 400 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 FUT5Q11128 374 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 PMCHL1Q16048 86 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 IGFBP7Q16270 282 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 MPV17LQ2QL34 196 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 C1orf140Q5VVS0 124 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 CLEC19AQ6UXS0 136 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 BRD3OSQ6XYD6 125 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 LINC00305Q7Z4B0 112 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 CLDND2Q8NHS1 167 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 CMTM2Q8TAZ6 248 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 DCANP1Q8TF63 244 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 LSM10Q969L4 123 aaKnown RBP2.84□□□□□ -1.95
YBX3-210ENST00000540975 KCNS1Q96KK3 526 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 RABAC1Q9UI14 185 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
YBX3-210ENST00000540975 MGAMO43451 1857 aa2.84□□□□□ -1.96
YBX3-210ENST00000540975 TNRC6AQ8NDV7 1962 aaKnown RBP2.83□□□□□ -1.96
YBX3-210ENST00000540975 MYO18AQ92614 2054 aaKnown RBP2.83□□□□□ -1.96
YBX3-210ENST00000540975 BPTFQ12830 3046 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 TRAV8-1A0A0A6YYK1 113 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 TRAV1-1A0A0B4J248 108 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 TRAV41A0A0B4J266 112 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 IGHV1-58A0A0C4DH39 117 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 RBAKDNA6NC62 111 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 H3BMG7 143 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 H3BUT2 72 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 LGALS9O00182 355 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 CCL22O00626 93 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 RBP4P02753 201 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 IL4P05112 153 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 IL9P15248 144 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 CBLN1P23435 193 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 HLA-DMBP28068 263 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 CCL23P55773 120 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 CCL20P78556 96 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 NOXRED1Q6NXP6 359 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 CYP2G1PQ6ZSU1 146 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 FAM19A3Q7Z5A8 133 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 RPP25LQ8N5L8 163 aaKnown RBP2.83□□□□□ -1.96
YBX3-210ENST00000540975 LINC00304Q8N9R0 145 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 C18orf32Q8TCD1 76 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 LRRC29Q8WV35 223 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 PPDPFLQ8WWR9 84 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 FGF13Q92913 245 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 C2orf50Q96LR7 162 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 PMCHL2Q9BQD1 86 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 WFDC6Q9BQY6 131 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 C11orf1Q9H5F2 150 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 KLK5Q9Y337 293 aaPredicted RBP2.83□□□□□ -1.96
YBX3-210ENST00000540975 KCNE3Q9Y6H6 103 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 PLXNA4Q9HCM2 1894 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 SCN8AQ9UQD0 1980 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 DOCK8Q8NF50 2099 aa2.83□□□□□ -1.96
YBX3-210ENST00000540975 COL4A5P29400 1685 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 TRAV8-3A0A0A6YYJ7 113 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 C4orf51C9J302 202 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 SYS1-DBNDD2H3BUS1 97 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 M0R381 172 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 CPSF4O95639 269 aaKnown RBP2.82□□□□□ -1.96
YBX3-210ENST00000540975 APCSP02743 223 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 COX7CP15954 63 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 IL3RAP26951 378 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 CD70P32970 193 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 ZNF138P52744 262 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 FXYD6P3P58550 94 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 SUPT4H1P63272 117 aaKnown RBP2.82□□□□□ -1.96
YBX3-210ENST00000540975 WFDC2Q14508 124 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 LGALS9BQ3B8N2 356 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 ETDBQ3ZM63 59 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 Q6ZS49 121 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 BPIFA4PQ86YQ2 179 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 DRAM1Q8N682 238 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 LINC00337Q8N6G1 96 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 TMEM75Q8N9X5 138 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 FAM213BQ8TBF2 198 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 COPS9Q8WXC6 57 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 MANBALQ9NQG1 85 aa2.82□□□□□ -1.96
YBX3-210ENST00000540975 TRGV5A0A0B4J1U4 118 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 IGHV3OR16-9A0A0B4J2B5 98 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 TRBV7-7A0A0K0K1E9 115 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 DPRXA6NFQ7 191 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 FAM24AA6NFZ4 105 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 A8MUN3 132 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 A8MWL6 223 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 ZNF736B4DX44 427 aaPredicted RBP2.81□□□□□ -1.96
YBX3-210ENST00000540975 LOC730098B7Z3J9 87 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 C17orf112F2Z3M2 114 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 H3BT86 120 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 J3QLW9 94 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 M0R378 163 aa2.81□□□□□ -1.96
YBX3-210ENST00000540975 LST1O00453 97 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms