RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 MAP1LC3B2A6NCE7 125 aa11.92□□□□□ -0.5
CACNA2D4-211ENST00000540728 IGHV3-53P01767 116 aa11.92□□□□□ -0.5
CACNA2D4-211ENST00000540728 TCRAP04437 139 aa11.92□□□□□ -0.5
CACNA2D4-211ENST00000540728 SUMO1P63165 101 aaKnown RBP11.92□□□□□ -0.5
CACNA2D4-211ENST00000540728 MAP1LC3BQ9GZQ8 125 aa11.92□□□□□ -0.5
CACNA2D4-211ENST00000540728 MDFICQ9P1T7 246 aa11.92□□□□□ -0.5
CACNA2D4-211ENST00000540728 KIAA1109Q2LD37 5005 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 F6UZH7 168 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 PAX4O43316 350 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 ZNF726P1Q15940 193 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 TDRG1Q3Y452 100 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 DPPA3Q6W0C5 159 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 KCNS1Q96KK3 526 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
CACNA2D4-211ENST00000540728 FBLL1A6NHQ2 334 aaKnown RBP11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 FHITP49789 147 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 FGF8P55075 233 aaPredicted RBP11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 ESRGQ1W209 222 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 TVP23CQ96ET8 276 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 Q9H8V8 135 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 EPDR1Q9UM22 224 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 PSG8Q9UQ74 426 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
CACNA2D4-211ENST00000540728 A0A096LPF7 62 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 TRGV4A0A0C4DH28 118 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 CYB561D1Q8N8Q1 229 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 SFT2D1Q8WV19 159 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 RASL10AQ92737 203 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 DNAH2Q9P225 4427 aa11.89□□□□□ -0.51
CACNA2D4-211ENST00000540728 FAT2Q9NYQ8 4349 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 A0A1B0GV50 99 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 GNRH2O43555 120 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 IFNA7P01567 189 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 H2AFB1P0C5Y9 115 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 RAB5CP51148 216 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 FLI1Q01543 452 aaPredicted RBP11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 TTC32Q5I0X7 151 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 C6orf223Q8N319 242 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 C8orf49Q96NF6 230 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 UPK3BQ9BT76 320 aa11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 MRPS16Q9Y3D3 137 aaKnown RBP11.88□□□□□ -0.51
CACNA2D4-211ENST00000540728 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 TEX46H3BTG2 121 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 M0R2P5 195 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 CRYBA4P53673 196 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 FHL2Q14192 279 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 SMUG1Q53HV7 270 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 PRNTQ86SH4 94 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 NKX6-2Q9C056 277 aaPredicted RBP11.87□□□□□ -0.51
CACNA2D4-211ENST00000540728 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 GCGP01275 180 aa11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 TYMSP04818 313 aa11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 PPT1P50897 306 aa11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 UBE2G2P60604 165 aa11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
CACNA2D4-211ENST00000540728 IGLV2-11P01706 119 aa11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 PFN1P07737 140 aaKnown RBP11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 SULT1A2P50226 295 aa11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 OR4C5Q8NGB2 326 aa11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 PCNPQ8WW12 178 aaKnown RBP11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 ZNF479Q96JC4 524 aa11.85□□□□□ -0.51
CACNA2D4-211ENST00000540728 DNAH17Q9UFH2 4485 aa11.84□□□□□ -0.51
CACNA2D4-211ENST00000540728 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
CACNA2D4-211ENST00000540728 ALKAL2Q6UX46 152 aa11.84□□□□□ -0.51
CACNA2D4-211ENST00000540728 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
CACNA2D4-211ENST00000540728 A0A1W2PPQ1 181 aa11.83□□□□□ -0.52
CACNA2D4-211ENST00000540728 ZNF80P51504 273 aaPredicted RBP11.83□□□□□ -0.52
CACNA2D4-211ENST00000540728 CST9LP1Q5W188 147 aa11.83□□□□□ -0.52
CACNA2D4-211ENST00000540728 NEGR1Q7Z3B1 354 aa11.83□□□□□ -0.52
CACNA2D4-211ENST00000540728 HIST1H2BAQ96A08 127 aa11.83□□□□□ -0.52
CACNA2D4-211ENST00000540728 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
CACNA2D4-211ENST00000540728 PEX7O00628 323 aa11.82□□□□□ -0.52
CACNA2D4-211ENST00000540728 ORM1P02763 201 aa11.82□□□□□ -0.52
CACNA2D4-211ENST00000540728 SRIP30626 198 aa11.82□□□□□ -0.52
CACNA2D4-211ENST00000540728 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
CACNA2D4-211ENST00000540728 TRAV34A0A0B4J273 112 aa11.81□□□□□ -0.52
CACNA2D4-211ENST00000540728 C9JCJ5 164 aa11.81□□□□□ -0.52
CACNA2D4-211ENST00000540728 SIVA1O15304 175 aa11.81□□□□□ -0.52
CACNA2D4-211ENST00000540728 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
CACNA2D4-211ENST00000540728 GYPEP15421 78 aa11.81□□□□□ -0.52
CACNA2D4-211ENST00000540728 LINC00479Q96M42 142 aa11.81□□□□□ -0.52
CACNA2D4-211ENST00000540728 PCLOQ9Y6V0 5065 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 NXPH4O95158 308 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 BTF3P20290 206 aaKnown RBP11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 TNP2Q05952 138 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 ZNF876PQ49A33 203 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 TXNDC17Q9BRA2 123 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 C11orf21Q9P2W6 132 aa11.8□□□□□ -0.52
CACNA2D4-211ENST00000540728 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms