RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 PGPA6NDG6 321 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 C9JCJ5 164 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 MPC2O95563 127 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 PET100P0DJ07 73 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 XGP55808 180 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 OR4C5Q8NGB2 326 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 CMTM2Q8TAZ6 248 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 M0R2P5 195 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 GNRH2O43555 120 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 RPL12P30050 165 aaKnown RBP9.55□□□□□ -0.88
SNHG1-213ENST00000540725 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 FAM74A1Q5RGS3 127 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 GOLT1AQ6ZVE7 132 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 MBD2Q9UBB5 411 aa9.55□□□□□ -0.88
SNHG1-213ENST00000540725 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 LOC100131303A0A0U1RQF7 123 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 F6UZH7 168 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 SSNA1O43805 119 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 CRYGDP07320 174 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 PQLC2Q6ZP29 291 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 C10orf126Q8N4M7 172 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 MARVELD1Q9BSK0 173 aa9.54□□□□□ -0.88
SNHG1-213ENST00000540725 SRRM2Q9UQ35 2752 aaKnown RBP9.54□□□□□ -0.88
SNHG1-213ENST00000540725 TRAV8-1A0A0A6YYK1 113 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 TYMSP04818 313 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
SNHG1-213ENST00000540725 SH2D6Q7Z4S9 175 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 NHLRC2Q8NBF2 726 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 TVP23CQ96ET8 276 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 WFDC1Q9HC57 220 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 TREM1Q9NP99 234 aa9.53□□□□□ -0.88
SNHG1-213ENST00000540725 A0A1W2PPV4 95 aa9.52□□□□□ -0.88
SNHG1-213ENST00000540725 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.88
SNHG1-213ENST00000540725 TIRAPP58753 221 aa9.52□□□□□ -0.88
SNHG1-213ENST00000540725 RAB2AP61019 212 aa9.52□□□□□ -0.88
SNHG1-213ENST00000540725 GNG5P63218 68 aa9.52□□□□□ -0.88
SNHG1-213ENST00000540725 KCNS1Q96KK3 526 aa9.52□□□□□ -0.88
SNHG1-213ENST00000540725 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.88
SNHG1-213ENST00000540725 INAFM2P0DMQ5 153 aa9.51□□□□□ -0.89
SNHG1-213ENST00000540725 PPT1P50897 306 aa9.51□□□□□ -0.89
SNHG1-213ENST00000540725 Q5VSD8 79 aa9.51□□□□□ -0.89
SNHG1-213ENST00000540725 FRZBQ92765 325 aa9.51□□□□□ -0.89
SNHG1-213ENST00000540725 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 HMGB3O15347 200 aaKnown RBP9.5□□□□□ -0.89
SNHG1-213ENST00000540725 GCSHP23434 173 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 ASB13Q8WXK3 278 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 FBLL1A6NHQ2 334 aaKnown RBP9.5□□□□□ -0.89
SNHG1-213ENST00000540725 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 TCTE3Q8IZS6 198 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 OR10G9Q8NGN4 311 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 OR10G7Q8NGN6 311 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
SNHG1-213ENST00000540725 PSCAO43653 123 aa9.49□□□□□ -0.89
SNHG1-213ENST00000540725 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
SNHG1-213ENST00000540725 ZNF876PQ49A33 203 aa9.49□□□□□ -0.89
SNHG1-213ENST00000540725 SLC25A29Q8N8R3 303 aa9.49□□□□□ -0.89
SNHG1-213ENST00000540725 C11orf21Q9P2W6 132 aa9.49□□□□□ -0.89
SNHG1-213ENST00000540725 TRAV8-6A0A0B4J262 113 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 SERTM2A0A1B0GWG4 89 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 LRCOL1A6NCL2 159 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 RS1O15537 224 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 PFN1P07737 140 aaKnown RBP9.48□□□□□ -0.89
SNHG1-213ENST00000540725 CDC34P49427 236 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-213ENST00000540725 ZNF80P51504 273 aaPredicted RBP9.48□□□□□ -0.89
SNHG1-213ENST00000540725 NDUFA5Q16718 116 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 C5orf17Q8NAS9 161 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 PRADC1Q9BSG0 188 aa9.48□□□□□ -0.89
SNHG1-213ENST00000540725 IGLV5-52A0A0A0MRZ9 124 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 CIDEAO60543 219 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
SNHG1-213ENST00000540725 TCRAP04437 139 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 RHOHQ15669 191 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 ZFP69Q49AA0 526 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 Q9HAA7 133 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
SNHG1-213ENST00000540725 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.89
SNHG1-213ENST00000540725 IGHV3-73A0A0B4J1V6 119 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 TRBV6-4A0A1B0GX49 114 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 K7EQM0 130 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 TAAR5O14804 337 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 ATP6V1G1O75348 118 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 GCGP01275 180 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 HAMPP81172 84 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 HSD17B11Q8NBQ5 300 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 NTN5Q8WTR8 489 aaPredicted RBP9.46□□□□□ -0.9
SNHG1-213ENST00000540725 C9orf85Q96MD7 179 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 PSG8Q9UQ74 426 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 ALG5Q9Y673 324 aa9.46□□□□□ -0.9
SNHG1-213ENST00000540725 IGHV3-30P01768 117 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms