RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 HBDP02042 147 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 FBLL1A6NHQ2 334 aaKnown RBP13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 TCF21O43680 179 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 IGHG2P01859 326 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 CTRLP40313 264 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 VAMP3Q15836 100 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 PRR9Q5T870 116 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 ZNF747Q9BV97 191 aa13.04□□□□□ -0.32
EPB41L3-204ENST00000540638 TRAV12-3A0A0B4J271 114 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 PEF1Q9UBV8 284 aaKnown RBP13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 HIVEP2P31629 2446 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 A6NDX4 124 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 FLNAP21333 2647 aaKnown RBP13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 C16orf54Q6UWD8 224 aa13.03□□□□□ -0.32
EPB41L3-204ENST00000540638 FN1P02751 2386 aaKnown RBP13.02□□□□□ -0.32
EPB41L3-204ENST00000540638 TRBV6-1A0A0K0K1D8 114 aa13.02□□□□□ -0.32
EPB41L3-204ENST00000540638 ANXA2RQ3ZCQ2 193 aa13.02□□□□□ -0.32
EPB41L3-204ENST00000540638 NDUFA4O00483 81 aa13.02□□□□□ -0.33
EPB41L3-204ENST00000540638 PET117Q6UWS5 81 aa13.02□□□□□ -0.33
EPB41L3-204ENST00000540638 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
EPB41L3-204ENST00000540638 FOXC2Q99958 501 aa13.02□□□□□ -0.33
EPB41L3-204ENST00000540638 TMEM208Q9BTX3 173 aa13.01□□□□□ -0.33
EPB41L3-204ENST00000540638 NPSP0C0P6 89 aa13.01□□□□□ -0.33
EPB41L3-204ENST00000540638 NEGR1Q7Z3B1 354 aa13.01□□□□□ -0.33
EPB41L3-204ENST00000540638 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
EPB41L3-204ENST00000540638 MEGF9Q9H1U4 602 aa13.01□□□□□ -0.33
EPB41L3-204ENST00000540638 TMEM160Q9NX00 188 aa13.01□□□□□ -0.33
EPB41L3-204ENST00000540638 HOXA3O43365 443 aaPredicted RBP13□□□□□ -0.33
EPB41L3-204ENST00000540638 SMIM17P0DL12 118 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 DKK2Q9UBU2 259 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 A0A1W2PRX2 142 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 CD7P09564 240 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 ASIPP42127 132 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 Q5PR19 223 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
EPB41L3-204ENST00000540638 IGLC6P0CF74 106 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 FAM159AQ6UWV7 190 aa13□□□□□ -0.33
EPB41L3-204ENST00000540638 Q96MF0 132 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 HECTD1Q9ULT8 2610 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 A0A087WWL8 130 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 TRAV21A0A0B4J279 112 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 FCER1GP30273 86 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 TTTY13Q9BZ97 58 aa12.99□□□□□ -0.33
EPB41L3-204ENST00000540638 CHD6Q8TD26 2715 aa12.98□□□□□ -0.33
EPB41L3-204ENST00000540638 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
EPB41L3-204ENST00000540638 ID1P41134 155 aa12.98□□□□□ -0.33
EPB41L3-204ENST00000540638 OR2K2Q8NGT1 345 aa12.98□□□□□ -0.33
EPB41L3-204ENST00000540638 TMEM190Q8WZ59 177 aa12.98□□□□□ -0.33
EPB41L3-204ENST00000540638 DPF1Q92782 380 aa12.98□□□□□ -0.33
EPB41L3-204ENST00000540638 ANKRD39Q53RE8 183 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 NF1P21359 2839 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 SLC25A16P16260 332 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 RAB37Q96AX2 223 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 KLK9Q9UKQ9 250 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 ITPR3Q14573 2671 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 SPINK13Q1W4C9 94 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 ZNF493Q6ZR52 646 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 MYOZ3Q8TDC0 251 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 ST20Q9HBF5 79 aa12.97□□□□□ -0.33
EPB41L3-204ENST00000540638 MXRA5Q9NR99 2828 aa12.96□□□□□ -0.34
EPB41L3-204ENST00000540638 OVOL1O14753 267 aa12.96□□□□□ -0.34
EPB41L3-204ENST00000540638 LINC00477Q96M19 166 aa12.96□□□□□ -0.34
EPB41L3-204ENST00000540638 JPT2Q9H910 190 aa12.96□□□□□ -0.34
EPB41L3-204ENST00000540638 SMPXQ9UHP9 88 aa12.96□□□□□ -0.34
EPB41L3-204ENST00000540638 RNF185Q96GF1 192 aa12.95□□□□□ -0.34
EPB41L3-204ENST00000540638 TRAV8-6A0A0B4J262 113 aa12.95□□□□□ -0.34
EPB41L3-204ENST00000540638 GTSCR1Q86UQ5 136 aa12.95□□□□□ -0.34
EPB41L3-204ENST00000540638 RPL39LQ96EH5 51 aaKnown RBP12.95□□□□□ -0.34
EPB41L3-204ENST00000540638 AP1S3Q96PC3 154 aa12.95□□□□□ -0.34
EPB41L3-204ENST00000540638 FBN2P35556 2912 aa12.95□□□□□ -0.34
EPB41L3-204ENST00000540638 HELZ2Q9BYK8 2649 aaKnown RBP12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 C9orf47Q6ZRZ4 202 aa12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 TMEM8BA6NDV4 472 aa12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 PPBPP02775 128 aa12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 RBAKDNA6NC62 111 aa12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 DLEU1O43261 78 aa12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 ZNF843Q8N446 348 aa12.94□□□□□ -0.34
EPB41L3-204ENST00000540638 A0A096LNJ9 63 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 GPHB5Q86YW7 130 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 EMP1P54849 157 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 DSCR9P59020 149 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 C18orf65Q6ZTR6 163 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 PCP2Q8IVA1 136 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 SPOCK3Q9BQ16 436 aa12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 NXT2Q9NPJ8 142 aaKnown RBP12.93□□□□□ -0.34
EPB41L3-204ENST00000540638 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
EPB41L3-204ENST00000540638 IGHV3-73A0A0B4J1V6 119 aa12.92□□□□□ -0.34
EPB41L3-204ENST00000540638 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
EPB41L3-204ENST00000540638 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
EPB41L3-204ENST00000540638 A0A087WW49 117 aa12.92□□□□□ -0.34
EPB41L3-204ENST00000540638 LINC01545Q5VT33 79 aa12.92□□□□□ -0.34
EPB41L3-204ENST00000540638 SLURP1P55000 103 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms