RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 TYMSP04818 313 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 ATP6V0CP27449 155 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 CDC34P49427 236 aaPredicted RBP8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 RAB24Q969Q5 203 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 KCNS1Q96KK3 526 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 TREM1Q9NP99 234 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 TNFSF18Q9UNG2 199 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 FAT1Q14517 4588 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 HMGB3O15347 200 aaKnown RBP8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 TCRAP04437 139 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 SFTA3P0C7M3 94 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 GNG5P63218 68 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 Q5BKY6 102 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 C5orf17Q8NAS9 161 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 PTH2Q96A98 100 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 MED28Q9H204 178 aa8.92□□□□□ -0.98
SEMA4D-223ENST00000540475 CIDEAO60543 219 aa8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 GIPP09681 153 aaPredicted RBP8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 GCHFRP30047 84 aa8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 ZNF80P51504 273 aaPredicted RBP8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 TIRAPP58753 221 aa8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 HSD17B11Q8NBQ5 300 aa8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 SDF2L1Q9HCN8 221 aa8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 C11orf21Q9P2W6 132 aa8.91□□□□□ -0.98
SEMA4D-223ENST00000540475 TRAV9-2A0A087WT02 112 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 RNF222A6NCQ9 220 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 FBLL1A6NHQ2 334 aaKnown RBP8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 F6UZH7 168 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 CXorf1O96002 111 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 DNAH10OSP0CZ25 163 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 GYPEP15421 78 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 GATA1P15976 413 aaPredicted RBP8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 SRIP30626 198 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 NFE4Q86UQ8 179 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 OR4C5Q8NGB2 326 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 TMEM167BQ9NRX6 74 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 NAGKQ9UJ70 344 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 EPDR1Q9UM22 224 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 RPH3ALQ9UNE2 315 aa8.9□□□□□ -0.98
SEMA4D-223ENST00000540475 VPS13BQ7Z7G8 4022 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 A0A1W2PRE2 83 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 C9JCJ5 164 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 TAAR5O14804 337 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 SUMO1P63165 101 aaKnown RBP8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 SH2D6Q7Z4S9 175 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 TMEM75Q8N9X5 138 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 C9orf85Q96MD7 179 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 TXNDC17Q9BRA2 123 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 NDFIP1Q9BT67 221 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 ACTR3CQ9C0K3 210 aaPredicted RBP8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 SH3BGRL3Q9H299 93 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 PGPEP1Q9NXJ5 209 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 PSG8Q9UQ74 426 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
SEMA4D-223ENST00000540475 K7EQM0 130 aa8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 RS1O15537 224 aa8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 PFN1P07737 140 aaKnown RBP8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 FLI1Q01543 452 aaPredicted RBP8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 CYB561D1Q8N8Q1 229 aa8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 PCNPQ8WW12 178 aaKnown RBP8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 SGK494Q96LW2 274 aa8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
SEMA4D-223ENST00000540475 G3V3Q6 166 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 GCGP01275 180 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 ZNF726P1Q15940 193 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 ZNF876PQ49A33 203 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 SMUG1Q53HV7 270 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 PIK3CD-AS1Q5SR53 167 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 CFAP126Q5VTH2 177 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 RPL7L1Q6DKI1 246 aaKnown RBP8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 WFDC10BQ8IUB3 73 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 Q8N1X5 172 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 MAPKAPK5-AS1Q8N8E1 139 aa8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 INO80EQ8NBZ0 244 aaPredicted RBP8.87□□□□□ -0.99
SEMA4D-223ENST00000540475 TRBV6-4A0A1B0GX49 114 aa8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 EVI2AP22794 236 aa8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 DPPA3Q6W0C5 159 aa8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 BOLA1Q9Y3E2 137 aa8.86□□□□□ -0.99
SEMA4D-223ENST00000540475 A0A087WTM6 91 aa8.85□□□□□ -0.99
SEMA4D-223ENST00000540475 LOC100131303A0A0U1RQF7 123 aa8.85□□□□□ -0.99
SEMA4D-223ENST00000540475 CTXND1A0A1B0GTU2 59 aa8.85□□□□□ -0.99
SEMA4D-223ENST00000540475 COX8CQ7Z4L0 72 aa8.85□□□□□ -0.99
SEMA4D-223ENST00000540475 NKX6-2Q9C056 277 aaPredicted RBP8.85□□□□□ -0.99
SEMA4D-223ENST00000540475 MSRB1Q9NZV6 116 aa8.85□□□□□ -0.99
SEMA4D-223ENST00000540475 BORCS7-ASMTA0A0B4J1R7 106 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 IGKV3D-20A0A0C4DH25 116 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 PGPEP1LA6NFU8 196 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 ERVFC1-1P60608 527 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 LINC01556Q5JQF7 62 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 DNLZQ5SXM8 178 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 PRNTQ86SH4 94 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 C10orf126Q8N4M7 172 aa8.84□□□□□ -0.99
SEMA4D-223ENST00000540475 OR2T35Q8NGX2 323 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms