RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 TPT1P13693 172 aaKnown RBP7.48□□□□□ -1.21
HMGA2-209ENST00000539662 OR5I1Q13606 314 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
HMGA2-209ENST00000539662 AKAP14Q86UN6 197 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 C9orf62Q8N4C0 152 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 ARL2-SNX15V9GYD0 113 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 DNAH17Q9UFH2 4485 aa7.48□□□□□ -1.21
HMGA2-209ENST00000539662 MUC4Q99102 2169 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 TRAV26-1A0A087WT03 109 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 UMAD1C9J7I0 102 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 NUDT3O95989 172 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 CRIP1P50238 77 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 TDRG1Q3Y452 100 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 CST9LP1Q5W188 147 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 FAM159AQ6UWV7 190 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 POM121L12Q8N7R1 296 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 VSIG2Q96IQ7 327 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 FAM210BQ96KR6 192 aa7.47□□□□□ -1.21
HMGA2-209ENST00000539662 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.21
HMGA2-209ENST00000539662 TRGV2A0A075B6R0 118 aa7.46□□□□□ -1.22
HMGA2-209ENST00000539662 TRAV21A0A0B4J279 112 aa7.46□□□□□ -1.22
HMGA2-209ENST00000539662 SERTM2A0A1B0GWG4 89 aa7.46□□□□□ -1.22
HMGA2-209ENST00000539662 H2AFB1P0C5Y9 115 aa7.46□□□□□ -1.22
HMGA2-209ENST00000539662 NKX2-5P52952 324 aaPredicted RBP7.46□□□□□ -1.22
HMGA2-209ENST00000539662 ZNF415Q09FC8 603 aa7.46□□□□□ -1.22
HMGA2-209ENST00000539662 Q86TA4 180 aa7.46□□□□□ -1.22
HMGA2-209ENST00000539662 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 IGKV3D-20A0A0C4DH25 116 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 SCO2A0A1W2PP80 73 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 K7EQM0 130 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 M0R2N4 97 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 SFTA3P0C7M3 94 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 P0DMU3 169 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 SMUG1Q53HV7 270 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 ZNF575Q86XF7 245 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 NHLRC2Q8NBF2 726 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 ZC2HC1AQ96GY0 325 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 C18orf15Q96N68 181 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 NDFIP1Q9BT67 221 aa7.45□□□□□ -1.22
HMGA2-209ENST00000539662 TRGV11A0A075B6L2 103 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 EREGO14944 169 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 PFN1P07737 140 aaKnown RBP7.44□□□□□ -1.22
HMGA2-209ENST00000539662 SULT1A2P50226 295 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 EIF5AP63241 154 aaKnown RBP7.44□□□□□ -1.22
HMGA2-209ENST00000539662 FHL2Q14192 279 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 LGALS9BQ3B8N2 356 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 DPPA3Q6W0C5 159 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 HIST1H2BAQ96A08 127 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
HMGA2-209ENST00000539662 BIRC6Q9NR09 4857 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 RNASE3P12724 160 aaKnown RBP7.43□□□□□ -1.22
HMGA2-209ENST00000539662 ZFP69Q49AA0 526 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 SAPCD1Q5SSQ6 148 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 SLC51BQ86UW2 128 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 C15orf53Q8NAA6 179 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 RASL10AQ92737 203 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
HMGA2-209ENST00000539662 SDF2L1Q9HCN8 221 aa7.43□□□□□ -1.22
HMGA2-209ENST00000539662 A0A096LPF7 62 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 SH2D1AO60880 128 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 LTAP01374 205 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 AKR1C3P42330 323 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 ESRGQ1W209 222 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 C9orf85Q96MD7 179 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 SPXQ9BT56 116 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 DERL1Q9BUN8 251 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 GNG13Q9P2W3 67 aa7.42□□□□□ -1.22
HMGA2-209ENST00000539662 PKD1P98161 4303 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 TRAV1-1A0A0B4J248 108 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 TRBV6-1A0A0K0K1D8 114 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 PGPEP1LA6NFU8 196 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 FBLL1A6NHQ2 334 aaKnown RBP7.41□□□□□ -1.22
HMGA2-209ENST00000539662 C9JCJ5 164 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 M0R036 132 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 M0R2P5 195 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 PPT1P50897 306 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 CRYBA4P53673 196 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 UBE2G1P62253 170 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 RNF212Q495C1 297 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 ALKAL2Q6UX46 152 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 FMC1Q96HJ9 113 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 KCNS1Q96KK3 526 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
HMGA2-209ENST00000539662 TMSB15BA0A087X1C1 80 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 LOC100131303A0A0U1RQF7 123 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 FABP5P3A8MUU1 101 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 KRBOX1C9JBD0 128 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 ZNF674Q2M3X9 581 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 Q6ZR54 194 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 JPT2Q9H910 190 aa7.4□□□□□ -1.22
HMGA2-209ENST00000539662 ZFP30Q9Y2G7 519 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms