RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
UBE3B-209ENST00000539584 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 A6NJY4 79 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 G3V318 75 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 NDUFA4O00483 81 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 NPFFO15130 113 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 EFNA4P52798 201 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 C19orf54Q5BKX5 351 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 ZZEF1O43149 2961 aa10.1□□□□□ -0.79
UBE3B-209ENST00000539584 TRAV41A0A0B4J266 112 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 IGHV1-69DA0A0B4J2H0 117 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 H3BUA1 57 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 K7ERJ3 54 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
UBE3B-209ENST00000539584 RRN3P1Q2M238 152 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 ZFAND2AQ8N6M9 145 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 TPRP12270 2363 aaKnown RBP10.09□□□□□ -0.79
UBE3B-209ENST00000539584 TEX48A0A1B0GUV7 120 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 RASL10AQ92737 203 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 PHLDA3Q9Y5J5 127 aa10.09□□□□□ -0.79
UBE3B-209ENST00000539584 ANKHD1Q8IWZ3 2542 aaKnown RBP10.08□□□□□ -0.8
UBE3B-209ENST00000539584 MGAQ8IWI9 3026 aa10.08□□□□□ -0.8
UBE3B-209ENST00000539584 FOXC1Q12948 553 aa10.08□□□□□ -0.8
UBE3B-209ENST00000539584 USMG5Q96IX5 58 aa10.08□□□□□ -0.8
UBE3B-209ENST00000539584 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
UBE3B-209ENST00000539584 RAXQ9Y2V3 346 aa10.08□□□□□ -0.8
UBE3B-209ENST00000539584 IGHV3OR16-13A0A075B7E8 117 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 IGHV3-74A0A0B4J1X5 117 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 ARL3P36405 182 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 ADGRG4Q8IZF6 3080 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 SOCS3O14543 225 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 CDSNQ15517 529 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 CD300EQ496F6 205 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-209ENST00000539584 C2orf66Q6UXQ4 117 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 SPOCK3Q9BQ16 436 aa10.07□□□□□ -0.8
UBE3B-209ENST00000539584 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-209ENST00000539584 ANKRD11Q6UB99 2663 aaPredicted RBP10.07□□□□□ -0.8
UBE3B-209ENST00000539584 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 A0A087WW49 117 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 HOXA3O43365 443 aaPredicted RBP10.06□□□□□ -0.8
UBE3B-209ENST00000539584 NXPH4O95158 308 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 IGF1P05019 195 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 LMO4P61968 165 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 GAGE13Q4V321 117 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 PRR9Q5T870 116 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 BAALCQ8WXS3 180 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 ARHGAP32A7KAX9 2087 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 LINC01548A6NM66 108 aa10.06□□□□□ -0.8
UBE3B-209ENST00000539584 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
UBE3B-209ENST00000539584 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
UBE3B-209ENST00000539584 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
UBE3B-209ENST00000539584 C20orf173Q96LM9 149 aa10.05□□□□□ -0.8
UBE3B-209ENST00000539584 TTC28Q96AY4 2481 aa10.05□□□□□ -0.8
UBE3B-209ENST00000539584 HERVK_113P61574 105 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 CYSLTR1Q9Y271 337 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 LGALS1P09382 135 aaKnown RBP10.04□□□□□ -0.8
UBE3B-209ENST00000539584 ANXA2RQ3ZCQ2 193 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 GPHB5Q86YW7 130 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 C14orf178Q8N769 122 aaPredicted RBP10.04□□□□□ -0.8
UBE3B-209ENST00000539584 ATP6V0E2Q8NHE4 81 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 SELENOKQ9Y6D0 94 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 LAMA5O15230 3695 aa10.04□□□□□ -0.8
UBE3B-209ENST00000539584 ZNF292O60281 2723 aa10.03□□□□□ -0.8
UBE3B-209ENST00000539584 H3BMG7 143 aa10.03□□□□□ -0.8
UBE3B-209ENST00000539584 WFDC2Q14508 124 aa10.03□□□□□ -0.8
UBE3B-209ENST00000539584 PRADC1Q9BSG0 188 aa10.03□□□□□ -0.8
UBE3B-209ENST00000539584 GAGE12HA6NDE8 117 aa10.02□□□□□ -0.8
UBE3B-209ENST00000539584 RNF223E7ERA6 249 aa10.02□□□□□ -0.8
UBE3B-209ENST00000539584 PRO0461Q9UI25 63 aa10.02□□□□□ -0.8
UBE3B-209ENST00000539584 DMXL1Q9Y485 3027 aa10.02□□□□□ -0.81
UBE3B-209ENST00000539584 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
UBE3B-209ENST00000539584 CIDEAO60543 219 aa10.02□□□□□ -0.81
UBE3B-209ENST00000539584 COX6B1P14854 86 aa10.02□□□□□ -0.81
UBE3B-209ENST00000539584 Q6ZQT7 251 aa10.02□□□□□ -0.81
UBE3B-209ENST00000539584 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
UBE3B-209ENST00000539584 BPESC1Q9GZL8 116 aa10.02□□□□□ -0.81
UBE3B-209ENST00000539584 VCYO14598 125 aa10.01□□□□□ -0.81
UBE3B-209ENST00000539584 MGPP08493 103 aa10.01□□□□□ -0.81
UBE3B-209ENST00000539584 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
UBE3B-209ENST00000539584 UBE2D1P51668 147 aa10.01□□□□□ -0.81
UBE3B-209ENST00000539584 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
UBE3B-209ENST00000539584 DLX4Q92988 240 aaPredicted RBP10.01□□□□□ -0.81
UBE3B-209ENST00000539584 TIMM17AQ99595 171 aa10.01□□□□□ -0.81
UBE3B-209ENST00000539584 KLK15Q9H2R5 256 aa10.01□□□□□ -0.81
UBE3B-209ENST00000539584 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
UBE3B-209ENST00000539584 UNQ9165/PRO28630Q6UXU0 137 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 KIR2DL4Q99706 377 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 ABCA4P78363 2273 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 WNK2Q9Y3S1 2297 aa10□□□□□ -0.81
UBE3B-209ENST00000539584 KLLNB2CW77 178 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms