RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RAB24Q969Q5 203 aa15.21■□□□□ 0.03
SCARB1-206ENST00000539320 NDFIP1Q9BT67 221 aa15.21■□□□□ 0.03
SCARB1-206ENST00000539320 TRAV4A0A0B4J268 109 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 MBP02144 154 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 TYMSP04818 313 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 GCHFRP30047 84 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 SRIP30626 198 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 IQCF2Q8IXL9 164 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 SDF2L1Q9HCN8 221 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 ABCA13Q86UQ4 5058 aa15.2■□□□□ 0.02
SCARB1-206ENST00000539320 M0R2P5 195 aa15.19■□□□□ 0.02
SCARB1-206ENST00000539320 GIPP09681 153 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-206ENST00000539320 LYPD5Q6UWN5 251 aa15.19■□□□□ 0.02
SCARB1-206ENST00000539320 K7EQD1 137 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 GNRH2O43555 120 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 CDK2AP2O75956 126 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 TCRAP04437 139 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 GYPEP15421 78 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 SERF2P84101 59 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 SUN5Q8TC36 379 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 ASB13Q8WXK3 278 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 KCNS1Q96KK3 526 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 SGK494Q96LW2 274 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 SH3BGRL3Q9H299 93 aa15.18■□□□□ 0.02
SCARB1-206ENST00000539320 ORM1P02763 201 aa15.17■□□□□ 0.02
SCARB1-206ENST00000539320 Q5BKY6 102 aa15.17■□□□□ 0.02
SCARB1-206ENST00000539320 Q6ZRN7 208 aaPredicted RBP15.17■□□□□ 0.02
SCARB1-206ENST00000539320 OR4C5Q8NGB2 326 aa15.17■□□□□ 0.02
SCARB1-206ENST00000539320 TMEM167BQ9NRX6 74 aa15.17■□□□□ 0.02
SCARB1-206ENST00000539320 K7EQM0 130 aa15.16■□□□□ 0.02
SCARB1-206ENST00000539320 ACTR3CQ9C0K3 210 aaPredicted RBP15.16■□□□□ 0.02
SCARB1-206ENST00000539320 GGTLC3B5MD39 225 aa15.15■□□□□ 0.02
SCARB1-206ENST00000539320 C9JCJ5 164 aa15.15■□□□□ 0.02
SCARB1-206ENST00000539320 CXorf1O96002 111 aa15.15■□□□□ 0.02
SCARB1-206ENST00000539320 KRTAP10-2P60368 255 aa15.15■□□□□ 0.02
SCARB1-206ENST00000539320 INO80EQ8NBZ0 244 aaPredicted RBP15.15■□□□□ 0.02
SCARB1-206ENST00000539320 TNFSF18Q9UNG2 199 aa15.15■□□□□ 0.02
SCARB1-206ENST00000539320 FXYD6-FXYD2A0A087WZ82 144 aa15.14■□□□□ 0.01
SCARB1-206ENST00000539320 RNF222A6NCQ9 220 aa15.14■□□□□ 0.01
SCARB1-206ENST00000539320 TXNDC17Q9BRA2 123 aa15.14■□□□□ 0.01
SCARB1-206ENST00000539320 PSG8Q9UQ74 426 aa15.14■□□□□ 0.01
SCARB1-206ENST00000539320 SUMO1P63165 101 aaKnown RBP15.13■□□□□ 0.01
SCARB1-206ENST00000539320 RPL7L1Q6DKI1 246 aaKnown RBP15.13■□□□□ 0.01
SCARB1-206ENST00000539320 CYB561D1Q8N8Q1 229 aa15.13■□□□□ 0.01
SCARB1-206ENST00000539320 LY96Q9Y6Y9 160 aa15.13■□□□□ 0.01
SCARB1-206ENST00000539320 BORCS7-ASMTA0A0B4J1R7 106 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 GCGP01275 180 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 ZNF80P51504 273 aaPredicted RBP15.12■□□□□ 0.01
SCARB1-206ENST00000539320 FLI1Q01543 452 aaPredicted RBP15.12■□□□□ 0.01
SCARB1-206ENST00000539320 ZFP69Q49AA0 526 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 WFDC10BQ8IUB3 73 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 TMEM75Q8N9X5 138 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 C11orf21Q9P2W6 132 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 EPDR1Q9UM22 224 aa15.12■□□□□ 0.01
SCARB1-206ENST00000539320 TAAR5O14804 337 aa15.11■□□□□ 0.01
SCARB1-206ENST00000539320 IGLV2-11P01706 119 aa15.11■□□□□ 0.01
SCARB1-206ENST00000539320 PFN1P07737 140 aaKnown RBP15.11■□□□□ 0.01
SCARB1-206ENST00000539320 GATA1P15976 413 aaPredicted RBP15.11■□□□□ 0.01
SCARB1-206ENST00000539320 SMUG1Q53HV7 270 aa15.11■□□□□ 0.01
SCARB1-206ENST00000539320 PRNTQ86SH4 94 aa15.11■□□□□ 0.01
SCARB1-206ENST00000539320 KRTAP4-5Q9BYR2 181 aa15.11■□□□□ 0.01
SCARB1-206ENST00000539320 TRAV9-2A0A087WT02 112 aa15.1■□□□□ 0.01
SCARB1-206ENST00000539320 LOC100131303A0A0U1RQF7 123 aa15.1■□□□□ 0.01
SCARB1-206ENST00000539320 FBLL1A6NHQ2 334 aaKnown RBP15.1■□□□□ 0.01
SCARB1-206ENST00000539320 NFE4Q86UQ8 179 aa15.1■□□□□ 0.01
SCARB1-206ENST00000539320 OR2T35Q8NGX2 323 aa15.1■□□□□ 0.01
SCARB1-206ENST00000539320 CTXND1A0A1B0GTU2 59 aa15.09■□□□□ 0.01
SCARB1-206ENST00000539320 A0A1W2PRE2 83 aa15.09■□□□□ 0.01
SCARB1-206ENST00000539320 ERVFC1-1P60608 527 aa15.09■□□□□ 0.01
SCARB1-206ENST00000539320 ZNF876PQ49A33 203 aa15.09■□□□□ 0.01
SCARB1-206ENST00000539320 SH2D6Q7Z4S9 175 aa15.09■□□□□ 0.01
SCARB1-206ENST00000539320 K7EP13 123 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 DNAH10OSP0CZ25 163 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 EVI2AP22794 236 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 ZNF726P1Q15940 193 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 MAPKAPK5-AS1Q8N8E1 139 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 NHLRC2Q8NBF2 726 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 C9orf85Q96MD7 179 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 TNFRSF18Q9Y5U5 241 aa15.08■□□□□ 0
SCARB1-206ENST00000539320 SMLR1H3BR10 107 aa15.07■□□□□ 0
SCARB1-206ENST00000539320 EREGO14944 169 aa15.07■□□□□ 0
SCARB1-206ENST00000539320 RS1O15537 224 aa15.07■□□□□ 0
SCARB1-206ENST00000539320 SAPCD1Q5SSQ6 148 aa15.07■□□□□ 0
SCARB1-206ENST00000539320 AKAP14Q86UN6 197 aa15.07■□□□□ 0
SCARB1-206ENST00000539320 PPT1P50897 306 aa15.06■□□□□ 0
SCARB1-206ENST00000539320 TIRAPP58753 221 aa15.06■□□□□ 0
SCARB1-206ENST00000539320 CFAP126Q5VTH2 177 aa15.06■□□□□ 0
SCARB1-206ENST00000539320 DPPA3Q6W0C5 159 aa15.06■□□□□ 0
SCARB1-206ENST00000539320 MSRB1Q9NZV6 116 aa15.06■□□□□ 0
SCARB1-206ENST00000539320 CIDEAO60543 219 aa15.05■□□□□ -0
SCARB1-206ENST00000539320 IFNA7P01567 189 aa15.05■□□□□ -0
SCARB1-206ENST00000539320 RHOHQ15669 191 aa15.05■□□□□ -0
SCARB1-206ENST00000539320 ZNF506Q5JVG8 444 aa15.05■□□□□ -0
SCARB1-206ENST00000539320 AKR1C8PQ5T2L2 129 aa15.05■□□□□ -0
SCARB1-206ENST00000539320 C10orf126Q8N4M7 172 aa15.05■□□□□ -0
SCARB1-206ENST00000539320 TRAV34A0A0B4J273 112 aa15.04■□□□□ -0
SCARB1-206ENST00000539320 G3V3Q6 166 aa15.04■□□□□ -0
SCARB1-206ENST00000539320 RNASE3P12724 160 aaKnown RBP15.04■□□□□ -0
SCARB1-206ENST00000539320 UBE2G2P60604 165 aa15.04■□□□□ -0
SCARB1-206ENST00000539320 SLC25A29Q8N8R3 303 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms