RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 WFDC2Q14508 124 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 VWC2Q2TAL6 325 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 LINC01556Q5JQF7 62 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 TOR2AQ5JU69 321 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 PXDC1Q5TGL8 231 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 TEPPQ6URK8 271 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 LCN15Q6UWW0 184 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 HSD17B11Q8NBQ5 300 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 OR10P1Q8NGE3 313 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 DAZAP1Q96EP5 407 aaKnown RBP7.93□□□□□ -1.14
YBX3-207ENST00000539204 ODF3Q96PU9 254 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 GGACTQ9BVM4 153 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 MRPL16Q9NX20 251 aaKnown RBP7.93□□□□□ -1.14
YBX3-207ENST00000539204 H3BP45 60 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 SNRPCP09234 159 aaKnown RBP7.92□□□□□ -1.14
YBX3-207ENST00000539204 HNRNPA3P51991 378 aaKnown RBP7.92□□□□□ -1.14
YBX3-207ENST00000539204 AKR1C1Q04828 323 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 SLC38A11Q08AI6 406 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 IQCF2Q8IXL9 164 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 OR2G3Q8NGZ4 309 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 SCGB1C1Q8TD33 95 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 BLNKQ8WV28 456 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 SLC50A1Q9BRV3 221 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 WDR61Q9GZS3 305 aaKnown RBP7.92□□□□□ -1.14
YBX3-207ENST00000539204 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 TIMM9Q9Y5J7 89 aa7.92□□□□□ -1.14
YBX3-207ENST00000539204 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 FNDC10F2Z333 226 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 LECT2O14960 151 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
YBX3-207ENST00000539204 Q6ZRG5 221 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 CYP2G1PQ6ZSU1 146 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 SH2D6Q7Z4S9 175 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 SH3BGRL3Q9H299 93 aa7.91□□□□□ -1.14
YBX3-207ENST00000539204 TRAV1-1A0A0B4J248 108 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 C7orf71A4D174 169 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 C9JCJ5 164 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 PRSS46E5RG02 174 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
YBX3-207ENST00000539204 MPDU1O75352 247 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 IGLV2-11P01706 119 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 RNASE4P34096 147 aaKnown RBP7.9□□□□□ -1.14
YBX3-207ENST00000539204 CAMLGP49069 296 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 PLP1P60201 277 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 SMDT1Q9H4I9 107 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 UQCC1Q9NVA1 299 aa7.9□□□□□ -1.14
YBX3-207ENST00000539204 IGHV3-30P01768 117 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 IGHV3-33P01772 117 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 SFTA3P0C7M3 94 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 LINC00869P0C866 280 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 IGHV3-30-3P0DP02 117 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 IGHV3-30-5P0DP03 117 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 PPT1P50897 306 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 TIRAPP58753 221 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 OR10J3Q5JRS4 329 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 AKR1C8PQ5T2L2 129 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 TMEM37Q8WXS4 190 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 ZNF479Q96JC4 524 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 TP53TG3Q9ULZ0 132 aa7.89□□□□□ -1.15
YBX3-207ENST00000539204 TMEM218A2RU14 115 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 SMCO3A2RU48 225 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 MBP02144 154 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 SELENOTP62341 195 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 LAGE3Q14657 143 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 Q6ZRU5 148 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 BPIFA4PQ86YQ2 179 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 NHLRC2Q8NBF2 726 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 MBD3L1Q8WWY6 194 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 WDR83OSQ9Y284 106 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 PXMP4Q9Y6I8 212 aa7.88□□□□□ -1.15
YBX3-207ENST00000539204 KLLNB2CW77 178 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 H3BTX0 84 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 SLC17A3O00476 420 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 GAS8-AS1O95177 125 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 GPX1P07203 203 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 BTN1A1Q13410 526 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 PATE2Q6UY27 113 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 Q8N976 141 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 FAM213BQ8TBF2 198 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 BAALCQ8WXS3 180 aa7.87□□□□□ -1.15
YBX3-207ENST00000539204 CARHSP1Q9Y2V2 147 aaKnown RBP7.87□□□□□ -1.15
YBX3-207ENST00000539204 IGHV1OR15-1A0A075B7D0 117 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 TRAV8-3A0A0A6YYJ7 113 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 UBE2L5PA0A1B0GUS4 154 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 C17orf112F2Z3M2 114 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 FHITP49789 147 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 RAB2AP61019 212 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 PEA15Q15121 130 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 C9orf47Q6ZRZ4 202 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 LINC00305Q7Z4B0 112 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 OR10G4Q8NGN3 311 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 LINC00477Q96M19 166 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 SEC11CQ9BY50 192 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 NPVFQ9HCQ7 196 aa7.86□□□□□ -1.15
YBX3-207ENST00000539204 NDUFS6O75380 124 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms