RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 PPBPP02775 128 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 ZNF688P0C7X2 276 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 IFI27P40305 119 aaPredicted RBP15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 SLURP1P55000 103 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 SNRPD3P62318 126 aaKnown RBP15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 C20orf144Q9BQM9 153 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 YAE1D1Q9NRH1 226 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 SIGLEC8Q9NYZ4 499 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 PAM16Q9Y3D7 125 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 NPYP01303 97 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 DEFB136Q30KP8 78 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 PSMG4Q5JS54 123 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 SMIM15Q7Z3B0 74 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 C14orf144Q96I85 54 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 NDUFAF3Q9BU61 184 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 TMEM70Q9BUB7 260 aa15.47■□□□□ 0.07
SMPDL3A-203ENST00000539041 LOC389332A0A1B0GUA5 103 aa15.46■□□□□ 0.07
SMPDL3A-203ENST00000539041 NCR2O95944 276 aa15.46■□□□□ 0.07
SMPDL3A-203ENST00000539041 ANXA2RQ3ZCQ2 193 aa15.46■□□□□ 0.07
SMPDL3A-203ENST00000539041 TCTEX1D4Q5JR98 221 aa15.46■□□□□ 0.07
SMPDL3A-203ENST00000539041 PDZD2O15018 2839 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 NBPF19A0A087WUL8 3843 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 KLLNB2CW77 178 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 ASIPP42127 132 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 KIR3DS1Q14943 382 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 SPANXN1Q5VSR9 72 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 DPF1Q92782 380 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 ODF3Q96PU9 254 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 LAMTOR2Q9Y2Q5 125 aa15.45■□□□□ 0.06
SMPDL3A-203ENST00000539041 MED14OSP0DP75 135 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 KHDC1LQ5JSQ8 128 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 LINC00173Q6ZV60 143 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 OR11H1Q8NG94 326 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 HSPB8Q9UJY1 196 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 ADAMTSL5Q6ZMM2 481 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 ESM1Q9NQ30 184 aa15.44■□□□□ 0.06
SMPDL3A-203ENST00000539041 A0A0J9YX75 114 aa15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 TCF21O43680 179 aa15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 S100A4P26447 101 aaKnown RBP15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 LEPP41159 167 aa15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 OR1N2Q8NGR9 330 aa15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 MAP1LC3AQ9H492 121 aa15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 PEMTQ9UBM1 199 aa15.43■□□□□ 0.06
SMPDL3A-203ENST00000539041 SYS1-DBNDD2H3BUS1 97 aa15.42■□□□□ 0.06
SMPDL3A-203ENST00000539041 CRXO43186 299 aaPredicted RBP15.42■□□□□ 0.06
SMPDL3A-203ENST00000539041 EVI2AP22794 236 aa15.42■□□□□ 0.06
SMPDL3A-203ENST00000539041 KLHL30-AS1Q8NEE0 82 aa15.42■□□□□ 0.06
SMPDL3A-203ENST00000539041 TIMM8BQ9Y5J9 83 aaPredicted RBP15.42■□□□□ 0.06
SMPDL3A-203ENST00000539041 FLNAP21333 2647 aaKnown RBP15.42■□□□□ 0.06
SMPDL3A-203ENST00000539041 SPATA45Q537H7 98 aa15.41■□□□□ 0.06
SMPDL3A-203ENST00000539041 SPATA12Q7Z6I5 190 aa15.41■□□□□ 0.06
SMPDL3A-203ENST00000539041 MAP1LC3CQ9BXW4 147 aa15.41■□□□□ 0.06
SMPDL3A-203ENST00000539041 AGRNO00468 2067 aa15.41■□□□□ 0.06
SMPDL3A-203ENST00000539041 TNFRSF6BO95407 300 aa15.4■□□□□ 0.06
SMPDL3A-203ENST00000539041 ZNF469Q96JG9 3925 aaPredicted RBP15.4■□□□□ 0.06
SMPDL3A-203ENST00000539041 C20orf202A1L168 122 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 C7orf71A4D174 169 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 DUSP14O95147 198 aaKnown RBP15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 ATOH7Q8N100 152 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 OR9G4Q8NGQ1 327 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 WFDC12Q8WWY7 111 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 DUX3Q96PT4 197 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 SCRT2Q9NQ03 307 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 A0A096LNJ9 63 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 GNRH2O43555 120 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 GAS8-AS1O95177 125 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 PET117Q6UWS5 81 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 MIEN1Q9BRT3 115 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 TLN2Q9Y4G6 2542 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 PHLDA3Q9Y5J5 127 aa15.39■□□□□ 0.05
SMPDL3A-203ENST00000539041 SCGB2A2Q13296 93 aa15.38■□□□□ 0.05
SMPDL3A-203ENST00000539041 FAM159AQ6UWV7 190 aa15.38■□□□□ 0.05
SMPDL3A-203ENST00000539041 FOXI2Q6ZQN5 318 aa15.38■□□□□ 0.05
SMPDL3A-203ENST00000539041 MUC4Q99102 2169 aa15.37■□□□□ 0.05
SMPDL3A-203ENST00000539041 M0R381 172 aa15.37■□□□□ 0.05
SMPDL3A-203ENST00000539041 RNASE3P12724 160 aaKnown RBP15.37■□□□□ 0.05
SMPDL3A-203ENST00000539041 DLX4Q92988 240 aaPredicted RBP15.37■□□□□ 0.05
SMPDL3A-203ENST00000539041 ZNF747Q9BV97 191 aa15.37■□□□□ 0.05
SMPDL3A-203ENST00000539041 TRAV2A0A0B4J234 112 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 TRAV12-3A0A0B4J271 114 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 LINC01546A6NGU7 62 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 GATA1P15976 413 aaPredicted RBP15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 ZNF705AQ6ZN79 300 aaPredicted RBP15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 NXT2Q9NPJ8 142 aaKnown RBP15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 CCDC168Q8NDH2 2452 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 TRAV9-2A0A087WT02 112 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 OR4C46A6NHA9 309 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 HBDP02042 147 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 RNASE1P07998 156 aaKnown RBP15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 TSPOP30536 169 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 OR2K2Q8NGT1 345 aa15.36■□□□□ 0.05
SMPDL3A-203ENST00000539041 IGKV3-20P01619 116 aa15.35■□□□□ 0.05
SMPDL3A-203ENST00000539041 MRAP2Q96G30 205 aa15.35■□□□□ 0.05
SMPDL3A-203ENST00000539041 DPH3P1Q9H4G8 78 aa15.35■□□□□ 0.05
SMPDL3A-203ENST00000539041 SONP18583 2426 aaKnown RBP15.35■□□□□ 0.05
SMPDL3A-203ENST00000539041 SPRY2O43597 315 aa15.34■□□□□ 0.05
SMPDL3A-203ENST00000539041 CDKN1BP46527 198 aa15.34■□□□□ 0.05
SMPDL3A-203ENST00000539041 HELZ2Q9BYK8 2649 aaKnown RBP15.34■□□□□ 0.05
SMPDL3A-203ENST00000539041 HIST2H2BDQ6DRA6 164 aa15.34■□□□□ 0.05
SMPDL3A-203ENST00000539041 Q8N8P6 123 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms