RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 S100A4P26447 101 aaKnown RBP6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 RPL23P62829 140 aaKnown RBP6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 IBA57Q5T440 356 aaKnown RBP6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 LINC01551Q86U37 167 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 NUDT10Q8NFP7 164 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 OR2D3Q8NGH3 330 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 NUDT11Q96G61 164 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 TP53TG3Q9ULZ0 132 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 TIMM8BQ9Y5J9 83 aaPredicted RBP6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 LY96Q9Y6Y9 160 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 X6R8D5 127 aa6.23□□□□□ -1.41
LPCAT3-208ENST00000538987 TRGV11A0A075B6L2 103 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 IGHV4-28A0A0C4DH34 117 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 XKRY2A2RUG3 117 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 GRIFINA4D1Z8 144 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 SNURFLB1AK76 121 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 KRBOX1C9JBD0 128 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 GATCO43716 136 aaKnown RBP6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 ZNF493Q6ZR52 646 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 C15orf54Q8N8G6 183 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 C16orf74Q96GX8 76 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 NEU1Q99519 415 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 RNASE7Q9H1E1 156 aaKnown RBP6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 C11orf21Q9P2W6 132 aa6.22□□□□□ -1.41
LPCAT3-208ENST00000538987 IGKV3D-20A0A0C4DH25 116 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 TYMSP04818 313 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 ASIPP42127 132 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 RPS20P60866 119 aaKnown RBP6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 ZNF415Q09FC8 603 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 TDRG1Q3Y452 100 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 TMEM263Q8WUH6 116 aaKnown RBP6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 ISOC2Q96AB3 205 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 LINC00467Q9BRT7 94 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 GSN-AS1Q9NRJ2 163 aa6.21□□□□□ -1.42
LPCAT3-208ENST00000538987 A0A0J9YWU9 116 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 C19orf71A6NCJ1 209 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 APOC3P02656 99 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 ADCYAP1P18509 176 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 SSTP61278 116 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 LINC01559Q495D7 138 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 OR10G8Q8NGN5 311 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 SFRP2Q96HF1 295 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 TPPP3Q9BW30 176 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 RPP21Q9H633 154 aaKnown RBP6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 NOP10Q9NPE3 64 aaKnown RBP6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 OSTCQ9NRP0 149 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 MDFICQ9P1T7 246 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 U3KQK5 164 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 MEGF8Q7Z7M0 2845 aa6.2□□□□□ -1.42
LPCAT3-208ENST00000538987 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 CXorf65A6NEN9 183 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 MT-ND4LP03901 98 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 ARMS2P0C7Q2 107 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 SPART-AS1P0CW21 52 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 GZMBP10144 247 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 FAM231DQ6ZW35 169 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 Q8NAQ8 132 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 RNASE8Q8TDE3 154 aaKnown RBP6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 SPXQ9BT56 116 aa6.19□□□□□ -1.42
LPCAT3-208ENST00000538987 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 A8MWL6 223 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 H3BVH4 76 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 PPP1R2P9O14990 202 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 TCL1AP56279 114 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 FAM222AQ5U5X8 452 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 PHLDA3Q9Y5J5 127 aa6.18□□□□□ -1.42
LPCAT3-208ENST00000538987 TRGV2A0A075B6R0 118 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 MUC21A0A0G2JKD1 596 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 MUC21A0A140T8X8 626 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 GAGE12BA1L429 117 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 M0R2P5 195 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 GAGE7O76087 117 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 GAGE12FP0CL80 117 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 GAGE12GP0CL81 117 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 GAGE12IP0CL82 117 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 RNASE3P12724 160 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 DAD1P61803 113 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 RNF212Q495C1 297 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 ZNF876PQ49A33 203 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 C10orf91Q5T1B1 145 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 SPANXN1Q5VSR9 72 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 FER1L6-AS1Q8NA97 138 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 SYT8Q8NBV8 401 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 C11orf45Q8TAV5 145 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 BORCS7Q96B45 105 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 ANAPC16Q96DE5 110 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 C11orf68Q9H3H3 251 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 RPS10P5Q9NQ39 176 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 MRPL16Q9NX20 251 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 IL36BQ9NZH7 164 aa6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 CARHSP1Q9Y2V2 147 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-208ENST00000538987 TEX48A0A1B0GUV7 120 aa6.16□□□□□ -1.42
LPCAT3-208ENST00000538987 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms