RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DNAH8Q96JB1 4490 aa9.37□□□□□ -0.91
SMARCA4-206ENST00000538456 IGHV3-38A0A0C4DH36 116 aa9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 RPL29P47914 159 aaKnown RBP9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 IQCF2Q8IXL9 164 aa9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 SLC25A31Q9H0C2 315 aa9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 ZNF492Q9P255 531 aa9.36□□□□□ -0.91
SMARCA4-206ENST00000538456 KANTRA0A1W2PQU2 76 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 FAM24AA6NFZ4 105 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 BCL2L11O43521 198 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 RPL12P30050 165 aaKnown RBP9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 PPT1P50897 306 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 ZNF138P52744 262 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 IFITM2Q01629 132 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 TMEM183BQ1AE95 376 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 GCSAMLQ5JQS6 135 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 TMEM183AQ8IXX5 376 aa9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 LYRM2Q9NU23 88 aaPredicted RBP9.35□□□□□ -0.91
SMARCA4-206ENST00000538456 FGF7P21781 194 aa9.34□□□□□ -0.91
SMARCA4-206ENST00000538456 LINC01556Q5JQF7 62 aa9.34□□□□□ -0.91
SMARCA4-206ENST00000538456 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
SMARCA4-206ENST00000538456 RASL10AQ92737 203 aa9.34□□□□□ -0.91
SMARCA4-206ENST00000538456 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
SMARCA4-206ENST00000538456 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 TAAR5O14804 337 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 VWC2Q2TAL6 325 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 SLC51BQ86UW2 128 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 SYT8Q8NBV8 401 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 OR4C5Q8NGB2 326 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 NAGKQ9UJ70 344 aa9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 LRP1Q07954 4544 aaKnown RBP9.33□□□□□ -0.92
SMARCA4-206ENST00000538456 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 IGHV3-16A0A0C4DH30 117 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 IGHV3-30P01768 117 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 IGHV3-33P01772 117 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 OR10J4P0C629 311 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 IGHV3-30-3P0DP02 117 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 IGHV3-30-5P0DP03 117 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 WFDC2Q14508 124 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 TMEM252Q8N6L7 170 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 SPXQ9BT56 116 aa9.32□□□□□ -0.92
SMARCA4-206ENST00000538456 TRGV11A0A075B6L2 103 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 TRAV8-6A0A0B4J262 113 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 SULT1A1P50225 295 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 ZNF266Q14584 549 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 OR10J3Q5JRS4 329 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 TEX261Q6UWH6 196 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 Q6ZSA8 131 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 SH2D6Q7Z4S9 175 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 STX12Q86Y82 276 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 STOML3Q8TAV4 291 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 PHYHIPLQ96FC7 376 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 FAM167A-AS1Q96KT0 104 aa9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 ZNF471Q9BX82 626 aaPredicted RBP9.31□□□□□ -0.92
SMARCA4-206ENST00000538456 TRBV7-9A0A0J9YWB2 115 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 LECT2O14960 151 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 HBG1P69891 147 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 HBG2P69892 147 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 NPCDR1Q9BY65 106 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 OR51M1Q9H341 326 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 CYTL1Q9NRR1 136 aa9.3□□□□□ -0.92
SMARCA4-206ENST00000538456 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 IFNA7P01567 189 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 TPT1P13693 172 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 CSN1S1P47710 185 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 TIRAPP58753 221 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 EIF5AP63241 154 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 NHLH2Q02577 135 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 Q6AWC8 147 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 FXYD5Q96DB9 178 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
SMARCA4-206ENST00000538456 M0R2P5 195 aa9.28□□□□□ -0.92
SMARCA4-206ENST00000538456 GNRH2O43555 120 aa9.28□□□□□ -0.92
SMARCA4-206ENST00000538456 GATA1P15976 413 aaPredicted RBP9.28□□□□□ -0.92
SMARCA4-206ENST00000538456 BORCS7-ASMTA0A0B4J1R7 106 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 RBAKDNA6NC62 111 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 RANP62826 216 aaKnown RBP9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 RPL7L1Q6DKI1 246 aaKnown RBP9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 Q8N3U1 123 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 OR5C1Q8NGR4 320 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 SMIM3Q9BZL3 60 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 PLA2G2DQ9UNK4 145 aa9.27□□□□□ -0.93
SMARCA4-206ENST00000538456 OR7C2O60412 319 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 PFN1P07737 140 aaKnown RBP9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 LAGE3Q14657 143 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 ATP6V1FQ16864 119 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 SLC25A29Q8N8R3 303 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 ATP5SQ99766 215 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 TM2D2Q9BX73 214 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 WFDC1Q9HC57 220 aa9.26□□□□□ -0.93
SMARCA4-206ENST00000538456 IGHV3-73A0A0B4J1V6 119 aa9.25□□□□□ -0.93
SMARCA4-206ENST00000538456 FBLL1A6NHQ2 334 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms