RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 H3BMM0 161 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 K7EIM0 57 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 FAM104BQ5XKR9 115 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 UBE2WQ96B02 151 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 PYGO2Q9BRQ0 406 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 LAMTOR2Q9Y2Q5 125 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 TRBV24-1A0A075B6N3 115 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 LINC01559Q495D7 138 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 PRSS57Q6UWY2 283 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 C2orf66Q6UXQ4 117 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 PCNX1Q96RV3 2341 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
LRP6-203ENST00000538239 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
LRP6-203ENST00000538239 IGLL5B9A064 214 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 Q8N8P6 123 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 TMEM141Q96I45 108 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 AGPAT4-IT1Q9H0P7 198 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 KLK5Q9Y337 293 aaPredicted RBP4.16□□□□□ -1.74
LRP6-203ENST00000538239 PCDH15Q96QU1 1955 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 WNK2Q9Y3S1 2297 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 ALPK3Q96L96 1907 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 TRAV8-2A0A0B4J237 113 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 ESDP10768 282 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 DEFB125Q8N687 156 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 ORAOV1Q8WV07 137 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 C5orf30Q96GV9 206 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 DYSFO75923 2080 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 ATP5G1P05496 136 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 SPINK8P0C7L1 97 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 LMO4P61968 165 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
LRP6-203ENST00000538239 C16orf54Q6UWD8 224 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 ADAMTSL5Q6ZMM2 481 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 NDUFA11Q86Y39 141 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 Q8NFD4 153 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
LRP6-203ENST00000538239 LINC00518Q8N0U6 118 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 DOCK10Q96BY6 2186 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 TEX48A0A1B0GUV7 120 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 CTSGP08311 255 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 UBE2BP63146 152 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 ATXN8Q156A1 80 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 Q6YL49 198 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 A0A1B0GV90 55 aa4.16□□□□□ -1.74
LRP6-203ENST00000538239 IGHG2P01859 326 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BLQ99880 126 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 SYS1-DBNDD2H3BUS1 97 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 PROP1O75360 226 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 ZC2HC1BQ5TFG8 222 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 ODF3L1Q8IXM7 274 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 NAA38Q9BRA0 125 aaKnown RBP4.15□□□□□ -1.74
LRP6-203ENST00000538239 EDA2RQ9HAV5 297 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 IGLV10-54A0A075B6I4 117 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 TNFRSF13BO14836 293 aaPredicted RBP4.15□□□□□ -1.74
LRP6-203ENST00000538239 DEFB1P60022 68 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 C1orf43Q9BWL3 253 aa4.15□□□□□ -1.74
LRP6-203ENST00000538239 TEX22C9J3V5 150 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 K7EQD1 137 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 EGR2P11161 476 aaPredicted RBP4.15□□□□□ -1.75
LRP6-203ENST00000538239 HSD52Q0P140 79 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 IGLL1P15814 213 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 MRPL23Q16540 153 aaKnown RBP4.15□□□□□ -1.75
LRP6-203ENST00000538239 TMEM126AQ9H061 195 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 ARFGEF3Q5TH69 2177 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 COLCA2A8K830 154 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 LTAP01374 205 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 KLF5Q13887 457 aaPredicted RBP4.15□□□□□ -1.75
LRP6-203ENST00000538239 HIST3H2BBQ8N257 126 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 STPG4Q8N801 248 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 MUC22E2RYF6 1773 aaPredicted RBP4.15□□□□□ -1.75
LRP6-203ENST00000538239 A0A087X0K7 114 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 IGLV1-47P01700 117 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 C3orf79P0CE67 100 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 PRR20EP86478 221 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 PRR20CP86479 221 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 PRR20DP86480 221 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 PRR20BP86481 221 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 PRR20AP86496 221 aa4.15□□□□□ -1.75
LRP6-203ENST00000538239 RBAKDNA6NC62 111 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 LINC01548A6NM66 108 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 ZNF479Q96JC4 524 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 MED13Q9UHV7 2174 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 CT83Q5H943 113 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 TRAV8-3A0A0A6YYJ7 113 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 SMIM27A0A1W2PRY6 76 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 E7EUB6 86 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 NPYP01303 97 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 UNQ9165/PRO28630Q6UXU0 137 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 ATP6V0E2Q8NHE4 81 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 KLF12Q9Y4X4 402 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 V9GYV3 84 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 SAMD5Q5TGI4 173 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 EML6Q6ZMW3 1958 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 CADP27708 2225 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 C9JQL5 133 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 SIGLEC8Q9NYZ4 499 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 MORN5Q5VZ52 161 aa4.14□□□□□ -1.75
LRP6-203ENST00000538239 HHLA3Q9XRX5 114 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms