RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 C11orf94C9JXX5 98 aa9.29□□□□□ -0.92
CHFR-216ENST00000538235 NHLRC2Q8NBF2 726 aa9.29□□□□□ -0.92
CHFR-216ENST00000538235 TMEM263Q8WUH6 116 aaKnown RBP9.29□□□□□ -0.92
CHFR-216ENST00000538235 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
CHFR-216ENST00000538235 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
CHFR-216ENST00000538235 LINC00467Q9BRT7 94 aa9.29□□□□□ -0.92
CHFR-216ENST00000538235 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 GCGP01275 180 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 BCL2P10415 239 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 RPL35P42766 123 aaKnown RBP9.28□□□□□ -0.92
CHFR-216ENST00000538235 LINC00612Q8N6U2 182 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
CHFR-216ENST00000538235 PYGO2Q9BRQ0 406 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 NIPSNAP3BQ9BS92 247 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 GSN-AS1Q9NRJ2 163 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
CHFR-216ENST00000538235 TRBV20OR9-2A0A075B6H5 130 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 LTAP01374 205 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 AKR1C3P42330 323 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 SSTP61278 116 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 ANXA2RQ3ZCQ2 193 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 NOP10Q9NPE3 64 aaKnown RBP9.27□□□□□ -0.93
CHFR-216ENST00000538235 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
CHFR-216ENST00000538235 TRBV6-1A0A0K0K1D8 114 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 CXorf65A6NEN9 183 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 GNRH2O43555 120 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 TYMSP04818 313 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 RHEBQ15382 184 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 ATRAIDQ6UW56 229 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 Q6ZTI0 123 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 COX8CQ7Z4L0 72 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
CHFR-216ENST00000538235 IGKV3D-20A0A0C4DH25 116 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 PGPEP1LA6NFU8 196 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 TCL1AP56279 114 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 MEF2BQ02080 365 aaPredicted RBP9.25□□□□□ -0.93
CHFR-216ENST00000538235 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 CEMP1Q6PRD7 247 aaPredicted RBP9.25□□□□□ -0.93
CHFR-216ENST00000538235 FMC1Q96HJ9 113 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 MLST8Q9BVC4 326 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
CHFR-216ENST00000538235 IGHV3-16A0A0C4DH30 117 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 TMEM189A5PLL7 270 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 CBY3A6NI87 242 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 SH2D1AO60880 128 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 PPT1P50897 306 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
CHFR-216ENST00000538235 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
CHFR-216ENST00000538235 TRAV21A0A0B4J279 112 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 C9JQL5 133 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 K7EQM0 130 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 PFN1P07737 140 aaKnown RBP9.23□□□□□ -0.93
CHFR-216ENST00000538235 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 SRSF3P84103 164 aaKnown RBP9.23□□□□□ -0.93
CHFR-216ENST00000538235 ZNF506Q5JVG8 444 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 ZNF493Q6ZR52 646 aa9.23□□□□□ -0.93
CHFR-216ENST00000538235 GAGE12BA1L429 117 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 SPINK4O60575 86 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 GAGE7O76087 117 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 GAGE12FP0CL80 117 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 GAGE12GP0CL81 117 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 GAGE12IP0CL82 117 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 RNASE3P12724 160 aaKnown RBP9.22□□□□□ -0.93
CHFR-216ENST00000538235 HOXA5P20719 270 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 UBE2G1P62253 170 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 RPL19P84098 196 aaKnown RBP9.22□□□□□ -0.93
CHFR-216ENST00000538235 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
CHFR-216ENST00000538235 ZNF674Q2M3X9 581 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
CHFR-216ENST00000538235 CENPWQ5EE01 88 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 IBA57Q5T440 356 aaKnown RBP9.22□□□□□ -0.93
CHFR-216ENST00000538235 NDFIP1Q9BT67 221 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 TIMM8BQ9Y5J9 83 aaPredicted RBP9.22□□□□□ -0.93
CHFR-216ENST00000538235 KMT2AQ03164 3969 aa9.22□□□□□ -0.93
CHFR-216ENST00000538235 RBFOX3A6NFN3 312 aa9.21□□□□□ -0.94
CHFR-216ENST00000538235 FBLL1A6NHQ2 334 aaKnown RBP9.21□□□□□ -0.94
CHFR-216ENST00000538235 DAD1P61803 113 aa9.21□□□□□ -0.94
CHFR-216ENST00000538235 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
CHFR-216ENST00000538235 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.94
CHFR-216ENST00000538235 C9orf85Q96MD7 179 aa9.21□□□□□ -0.94
CHFR-216ENST00000538235 APLNQ9ULZ1 77 aa9.21□□□□□ -0.94
CHFR-216ENST00000538235 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
CHFR-216ENST00000538235 TRAV10A0A0B4J240 114 aa9.2□□□□□ -0.94
CHFR-216ENST00000538235 NUPR2A6NF83 97 aa9.2□□□□□ -0.94
CHFR-216ENST00000538235 COLCA2A8K830 154 aa9.2□□□□□ -0.94
CHFR-216ENST00000538235 M0R036 132 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms