RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 EIF4E3Q8N5X7 224 aaKnown RBP10.39□□□□□ -0.75
LRRK1-211ENST00000538064 CYB561D1Q8N8Q1 229 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 ARL2-SNX15V9GYD0 113 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 PCLOQ9Y6V0 5065 aa10.39□□□□□ -0.75
LRRK1-211ENST00000538064 F6UZH7 168 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 H3BNG1 76 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 PRR9Q5T870 116 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 CST9LP1Q5W188 147 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 HIST1H2BAQ96A08 127 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 C18orf15Q96N68 181 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
LRRK1-211ENST00000538064 RYR1P21817 5038 aa10.37□□□□□ -0.75
LRRK1-211ENST00000538064 A0A1B0GV50 99 aa10.37□□□□□ -0.75
LRRK1-211ENST00000538064 PSG8Q9UQ74 426 aa10.37□□□□□ -0.75
LRRK1-211ENST00000538064 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
LRRK1-211ENST00000538064 A0A0J9YY99 117 aa10.36□□□□□ -0.75
LRRK1-211ENST00000538064 RGS13O14921 159 aa10.36□□□□□ -0.75
LRRK1-211ENST00000538064 NKX2-5P52952 324 aaPredicted RBP10.36□□□□□ -0.75
LRRK1-211ENST00000538064 TCL1AP56279 114 aa10.36□□□□□ -0.75
LRRK1-211ENST00000538064 FLI1Q01543 452 aaPredicted RBP10.36□□□□□ -0.75
LRRK1-211ENST00000538064 IBA57Q5T440 356 aaKnown RBP10.36□□□□□ -0.75
LRRK1-211ENST00000538064 TMEM75Q8N9X5 138 aa10.36□□□□□ -0.75
LRRK1-211ENST00000538064 TREM1Q9NP99 234 aa10.36□□□□□ -0.75
LRRK1-211ENST00000538064 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 TRGV1A0A0A0MS02 117 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 TRAV1-1A0A0B4J248 108 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 PEX7O00628 323 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 SPINK4O60575 86 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 PAGE4O60829 102 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 MED14OSP0DP75 135 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 SAPCD1Q5SSQ6 148 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
LRRK1-211ENST00000538064 IGHV1OR15-1A0A075B7D0 117 aa10.34□□□□□ -0.75
LRRK1-211ENST00000538064 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
LRRK1-211ENST00000538064 Q6AWC8 147 aa10.34□□□□□ -0.75
LRRK1-211ENST00000538064 PRNTQ86SH4 94 aa10.34□□□□□ -0.75
LRRK1-211ENST00000538064 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
LRRK1-211ENST00000538064 KLF12Q9Y4X4 402 aa10.34□□□□□ -0.75
LRRK1-211ENST00000538064 UBE2G1P62253 170 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 TTC32Q5I0X7 151 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 Q6ZQT7 251 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 VSIG2Q96IQ7 327 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 Q9H8V8 135 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 GNG13Q9P2W3 67 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
LRRK1-211ENST00000538064 MRPS16Q9Y3D3 137 aaKnown RBP10.33□□□□□ -0.76
LRRK1-211ENST00000538064 TRAV34A0A0B4J273 112 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 IFNA1P01562 189 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 IGLV2-11P01706 119 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 AKR1C3P42330 323 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 TNP2Q05952 138 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 ZNF415Q09FC8 603 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 SMUG1Q53HV7 270 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 ALKAL2Q6UX46 152 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 TVP23CQ96ET8 276 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 FMC1Q96HJ9 113 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 KRTAP17-1Q9BYP8 105 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 LRP1BQ9NZR2 4599 aa10.32□□□□□ -0.76
LRRK1-211ENST00000538064 A0A096LPF7 62 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 S100A9P06702 114 aaKnown RBP10.31□□□□□ -0.76
LRRK1-211ENST00000538064 BLOC1S1P78537 153 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 ESRGQ1W209 222 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 ZNF575Q86XF7 245 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 TXNDC17Q9BRA2 123 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 KRTAP1-5Q9BYS1 174 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 MRPL16Q9NX20 251 aaKnown RBP10.31□□□□□ -0.76
LRRK1-211ENST00000538064 NAGKQ9UJ70 344 aa10.31□□□□□ -0.76
LRRK1-211ENST00000538064 TRGV11A0A075B6L2 103 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 A0A1W2PPQ1 181 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 GCGP01275 180 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 TAGLN2P37802 199 aaKnown RBP10.3□□□□□ -0.76
LRRK1-211ENST00000538064 CCL20P78556 96 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 KCNS1Q96KK3 526 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 ZFP30Q9Y2G7 519 aa10.3□□□□□ -0.76
LRRK1-211ENST00000538064 HSPG2P98160 4391 aa10.29□□□□□ -0.76
LRRK1-211ENST00000538064 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
LRRK1-211ENST00000538064 PFN1P07737 140 aaKnown RBP10.29□□□□□ -0.76
LRRK1-211ENST00000538064 TMEM183BQ1AE95 376 aa10.29□□□□□ -0.76
LRRK1-211ENST00000538064 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
LRRK1-211ENST00000538064 Q86TA4 180 aa10.29□□□□□ -0.76
LRRK1-211ENST00000538064 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
LRRK1-211ENST00000538064 SCO2A0A1W2PP80 73 aa10.28□□□□□ -0.76
LRRK1-211ENST00000538064 IGHV3-53P01767 116 aa10.28□□□□□ -0.76
LRRK1-211ENST00000538064 SDF2L1Q9HCN8 221 aa10.28□□□□□ -0.76
LRRK1-211ENST00000538064 ICOSQ9Y6W8 199 aa10.28□□□□□ -0.76
LRRK1-211ENST00000538064 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.76
LRRK1-211ENST00000538064 PAX4O43316 350 aa10.27□□□□□ -0.77
LRRK1-211ENST00000538064 BTF3P20290 206 aaKnown RBP10.27□□□□□ -0.77
LRRK1-211ENST00000538064 SLAQ13239 276 aa10.27□□□□□ -0.77
LRRK1-211ENST00000538064 MDFICQ9P1T7 246 aa10.27□□□□□ -0.77
LRRK1-211ENST00000538064 PRO0255Q9UI72 69 aa10.27□□□□□ -0.77
LRRK1-211ENST00000538064 ABCA13Q86UQ4 5058 aa10.26□□□□□ -0.77
LRRK1-211ENST00000538064 FABP5P3A8MUU1 101 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms