RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 CCL20P78556 96 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 FLI1Q01543 452 aaPredicted RBP5.82□□□□□ -1.48
SPARC-208ENST00000538026 OR5I1Q13606 314 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 FHL2Q14192 279 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 TMEM183BQ1AE95 376 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 ESRGQ1W209 222 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 RNF212Q495C1 297 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 FAM74A1Q5RGS3 127 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 PRNTQ86SH4 94 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 TMEM183AQ8IXX5 376 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 CYB561D1Q8N8Q1 229 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 ZNRF2Q8NHG8 242 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 RASL10AQ92737 203 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 ZNF471Q9BX82 626 aaPredicted RBP5.82□□□□□ -1.48
SPARC-208ENST00000538026 MAP1LC3BQ9GZQ8 125 aa5.82□□□□□ -1.48
SPARC-208ENST00000538026 A0A096LPF7 62 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 TRAV21A0A0B4J279 112 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 IGKV3D-20A0A0C4DH25 116 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 PEX7O00628 323 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 NUDT3O95989 172 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 GCGP01275 180 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 IGHV3-53P01767 116 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 LGALS9BQ3B8N2 356 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 DPPA3Q6W0C5 159 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 IQCF2Q8IXL9 164 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 C15orf53Q8NAA6 179 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 STOML3Q8TAV4 291 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 ZNF479Q96JC4 524 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 ATG101Q9BSB4 218 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 NAGKQ9UJ70 344 aa5.81□□□□□ -1.48
SPARC-208ENST00000538026 PCLOQ9Y6V0 5065 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 A0A1B0GV50 99 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 SERTM2A0A1B0GWG4 89 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 SFTA3P0C7M3 94 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
SPARC-208ENST00000538026 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 COX8CQ7Z4L0 72 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 FAM213BQ8TBF2 198 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 ARL2-SNX15V9GYD0 113 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
SPARC-208ENST00000538026 hCG_2014768A0A024R1R8 64 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 TRGV2A0A075B6R0 118 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 KANTRA0A1W2PQU2 76 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 UMAD1C9J7I0 102 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 H3BNG1 76 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 PAGE4O60829 102 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 IFNA7P01567 189 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 C1QBP02746 253 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 CRYBA4P53673 196 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 ZNF415Q09FC8 603 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 Q86TA4 180 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 SFT2D1Q8WV19 159 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 ZC2HC1AQ96GY0 325 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 C9orf85Q96MD7 179 aa5.79□□□□□ -1.48
SPARC-208ENST00000538026 TRGV11A0A075B6L2 103 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 TRBV6-1A0A0K0K1D8 114 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 PGPEP1LA6NFU8 196 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 PFN1P07737 140 aaKnown RBP5.78□□□□□ -1.48
SPARC-208ENST00000538026 SMUG1Q53HV7 270 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 UBE2DNLQ8IWF7 75 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 C9orf62Q8N4C0 152 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 HIST1H2BAQ96A08 127 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 SPXQ9BT56 116 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 HHLA3Q9XRX5 114 aa5.78□□□□□ -1.48
SPARC-208ENST00000538026 TRAV1-1A0A0B4J248 108 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 LOC100131303A0A0U1RQF7 123 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 SCO2A0A1W2PP80 73 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 KRBOX1C9JBD0 128 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 M0R2P5 195 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 LTAP01374 205 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 H2AFB1P0C5Y9 115 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 TPT1P13693 172 aaKnown RBP5.77□□□□□ -1.49
SPARC-208ENST00000538026 SULT1A2P50226 295 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 SAPCD1Q5SSQ6 148 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 CST9LP1Q5W188 147 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 Q6ZSN1 163 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 MLST8Q9BVC4 326 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 NKX6-2Q9C056 277 aaPredicted RBP5.77□□□□□ -1.49
SPARC-208ENST00000538026 SDF2L1Q9HCN8 221 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 Q9UF83 564 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 PRO0255Q9UI72 69 aa5.77□□□□□ -1.49
SPARC-208ENST00000538026 TRAV4A0A0B4J268 109 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 NBDYA0A0U1RRE5 68 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 FBLL1A6NHQ2 334 aaKnown RBP5.76□□□□□ -1.49
SPARC-208ENST00000538026 K7EQM0 130 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 RS1O15537 224 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 PAX4O43316 350 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 SH2D1AO60880 128 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 PFDN1O60925 122 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 FAM3BP58499 235 aaPredicted RBP5.76□□□□□ -1.49
SPARC-208ENST00000538026 ZNF674Q2M3X9 581 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 CFAP126Q5VTH2 177 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 NHLRC2Q8NBF2 726 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 KCNS1Q96KK3 526 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 NDFIP1Q9BT67 221 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 UPK3BQ9BT76 320 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 JPT2Q9H910 190 aa5.76□□□□□ -1.49
SPARC-208ENST00000538026 FABP5P3A8MUU1 101 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms