RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 RPL12P30050 165 aaKnown RBP5.71□□□□□ -1.5
USP28-203ENST00000537490 TAS2R45P59539 299 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 TDRG1Q3Y452 100 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 KHDC3LQ587J8 217 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 CDPF1Q6NVV7 123 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 OR4C5Q8NGB2 326 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 PCNPQ8WW12 178 aaKnown RBP5.71□□□□□ -1.5
USP28-203ENST00000537490 TMED6Q8WW62 240 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 PTTG2Q9NZH5 202 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 MBD2Q9UBB5 411 aa5.71□□□□□ -1.5
USP28-203ENST00000537490 TRAV8-1A0A0A6YYK1 113 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 F6UZH7 168 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 M0R2P5 195 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 TYMSP04818 313 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 INAFM2P0DMQ5 153 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 GNG5P63218 68 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 GOLT1AQ6ZVE7 132 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 CMTM2Q8TAZ6 248 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 MARVELD1Q9BSK0 173 aa5.7□□□□□ -1.5
USP28-203ENST00000537490 TRAV21A0A0B4J279 112 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 C9JCJ5 164 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 K7EP13 123 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 HMGB3O15347 200 aaKnown RBP5.69□□□□□ -1.5
USP28-203ENST00000537490 SSNA1O43805 119 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 CRYGDP07320 174 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 GATA1P15976 413 aaPredicted RBP5.69□□□□□ -1.5
USP28-203ENST00000537490 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
USP28-203ENST00000537490 RAB2AP61019 212 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 ACOT6Q3I5F7 207 aaPredicted RBP5.69□□□□□ -1.5
USP28-203ENST00000537490 FAM74A1Q5RGS3 127 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 SGK494Q96LW2 274 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 TREM1Q9NP99 234 aa5.69□□□□□ -1.5
USP28-203ENST00000537490 A0A1W2PPV4 95 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 SMR3BP02814 79 aaPredicted RBP5.68□□□□□ -1.5
USP28-203ENST00000537490 PET100P0DJ07 73 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 GCSHP23434 173 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 ZNF80P51504 273 aaPredicted RBP5.68□□□□□ -1.5
USP28-203ENST00000537490 Q5VSD8 79 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 DPPA3Q6W0C5 159 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 PQLC2Q6ZP29 291 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 ARL6IP6Q8N6S5 226 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 NHLRC2Q8NBF2 726 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 SDF2L1Q9HCN8 221 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 C11orf21Q9P2W6 132 aa5.68□□□□□ -1.5
USP28-203ENST00000537490 IGHV3-38A0A0C4DH36 116 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 LRCOL1A6NCL2 159 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 A6NHS1 94 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 RS1O15537 224 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 PPT1P50897 306 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 TIRAPP58753 221 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 HAMPP81172 84 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 SH2D6Q7Z4S9 175 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 C10orf126Q8N4M7 172 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 SLC25A29Q8N8R3 303 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 OR10G9Q8NGN4 311 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 OR10G7Q8NGN6 311 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 ASB13Q8WXK3 278 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 FRZBQ92765 325 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 KCNS1Q96KK3 526 aa5.67□□□□□ -1.5
USP28-203ENST00000537490 FAT1Q14517 4588 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 IGHV3-73A0A0B4J1V6 119 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 FBLL1A6NHQ2 334 aaKnown RBP5.66□□□□□ -1.5
USP28-203ENST00000537490 IBA57-AS1B1ANH7 110 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 PFN1P07737 140 aaKnown RBP5.66□□□□□ -1.5
USP28-203ENST00000537490 STAG3L2P0CL84 134 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 STAG3L3P0CL85 134 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 ZNF876PQ49A33 203 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 CFAP126Q5VTH2 177 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 TMEM75Q8N9X5 138 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 PSG8Q9UQ74 426 aa5.66□□□□□ -1.5
USP28-203ENST00000537490 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 TRAV8-6A0A0B4J262 113 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 TRBV6-4A0A1B0GX49 114 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 PGPEP1LA6NFU8 196 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 TAAR5O14804 337 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 PSCAO43653 123 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 IGLV2-11P01706 119 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 IGHV3-30P01768 117 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 IGHV3-33P01772 117 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 TCRAP04437 139 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 IGHV3-30-3P0DP02 117 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 IGHV3-30-5P0DP03 117 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
USP28-203ENST00000537490 GCHFRP30047 84 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 CDC34P49427 236 aaPredicted RBP5.65□□□□□ -1.5
USP28-203ENST00000537490 SUMO1P63165 101 aaKnown RBP5.65□□□□□ -1.5
USP28-203ENST00000537490 OR10J3Q5JRS4 329 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 Q6ZSN1 163 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 C5orf17Q8NAS9 161 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 HSD17B11Q8NBQ5 300 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 SUN5Q8TC36 379 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 RAB24Q969Q5 203 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 C9orf85Q96MD7 179 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 PRADC1Q9BSG0 188 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 NDFIP1Q9BT67 221 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 Q9HAA7 133 aa5.65□□□□□ -1.5
USP28-203ENST00000537490 SERTM2A0A1B0GWG4 89 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms