RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZCCHC24Q8N2G6 241 aaKnown RBP8.51□□□□□ -1.05
CLSTN3-207ENST00000537408 GP9P14770 177 aa8.51□□□□□ -1.05
CLSTN3-207ENST00000537408 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.51□□□□□ -1.055e-6■■■□□ 16.7
CLSTN3-207ENST00000537408 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
CLSTN3-207ENST00000537408 IGHV1-18A0A0C4DH31 117 aa8.51□□□□□ -1.05
CLSTN3-207ENST00000537408 OOSP1A8MZH6 123 aa8.51□□□□□ -1.05
CLSTN3-207ENST00000537408 HIVEP2P31629 2446 aa8.51□□□□□ -1.05
CLSTN3-207ENST00000537408 IGLC6P0CF74 106 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 LEAP2Q969E1 77 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 EXPH5Q8NEV8 1989 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 TRAV12-1A0A0B4J245 112 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 M0R2P5 195 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 SAA2P0DJI9 122 aaPredicted RBP8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 ZNF672Q499Z4 452 aaPredicted RBP8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 Q96MF0 132 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 HCFC1P51610 2035 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 LGALS9O00182 355 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 LYZP61626 148 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
CLSTN3-207ENST00000537408 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 IQCF6A8MYZ5 107 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 IGHV3-48P01763 117 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 ZNRF1Q8ND25 227 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 SLC25A15Q9Y619 301 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 TRBV7-7A0A0K0K1E9 115 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 H7C2G1 150 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 PLCE1Q9P212 2302 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 IGHV4-39P01824 125 aa8.49□□□□□ -1.05
CLSTN3-207ENST00000537408 SH2D1AO60880 128 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 SAA1P0DJI8 122 aaPredicted RBP8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 UTF1Q5T230 341 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 HIST2H2BCQ6DN03 193 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 APELAP0DMC3 54 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 C11orf53Q8IXP5 236 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 SCGB3A1Q96QR1 104 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 DNAH14Q0VDD8 3507 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 CSPG4Q6UVK1 2322 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 FAM240AA0A1B0GVK7 77 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 IGLV2-11P01706 119 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 TRACP01848 142 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 FAM201AQ5SY85 155 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 TMEM170BQ5T4T1 132 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 BAALCQ8WXS3 180 aa8.48□□□□□ -1.05
CLSTN3-207ENST00000537408 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 FSTL3O95633 263 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 RPL11P62913 178 aaKnown RBP8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 TFF1P04155 84 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 FAM90A1Q86YD7 464 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 TRGV11A0A075B6L2 103 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 NDUFA4L2Q9NRX3 87 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 MED13LQ71F56 2210 aa8.47□□□□□ -1.05
CLSTN3-207ENST00000537408 LYPD1Q8N2G4 141 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 USP24Q9UPU5 2620 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 RBAKDNA6NC62 111 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 CFC1BP0CG36 223 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 CFC1P0CG37 223 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 P0DMU3 169 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 FAM231AP0DMU4 169 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 FAM231CP0DMU5 169 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 ZNF134P52741 427 aa8.46□□□□□ -1.05
CLSTN3-207ENST00000537408 CDH23Q9H251 3354 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 IGKV1D-37A0A075B6S9 117 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 C17orf100A8MU93 164 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 AGRNO00468 2067 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 SZT2Q5T011 3432 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 IGHV3-72A0A0B4J1Y9 119 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 ACYP1P07311 99 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 COX6CP09669 75 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 DUX3Q96PT4 197 aa8.46□□□□□ -1.06
CLSTN3-207ENST00000537408 ZNF785A8K8V0 405 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 MRPS12O15235 138 aaKnown RBP8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 ORM1P02763 201 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 PSMG3-AS1Q96PY0 264 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 ASCL2Q99929 193 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 IGHV3-21A0A0B4J1V1 117 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 ZNF503-AS2A6NEH8 195 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 OVOL3O00110 214 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 C8orf49Q96NF6 230 aa8.45□□□□□ -1.06
CLSTN3-207ENST00000537408 XIRP2A4UGR9 3374 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 WNK1Q9H4A3 2382 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 B4DSR2 109 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 INS-IGF2F8WCM5 200 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 ORMDL2Q53FV1 153 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 C5orf42Q9H799 3197 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 LOXL3P58215 753 aa8.44□□□□□ -1.06
CLSTN3-207ENST00000537408 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms