RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MAP1LC3B2A6NCE7 125 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 GNRH2O43555 120 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 TYMSP04818 313 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 ZNF80P51504 273 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 FGF8P55075 233 aaPredicted RBP11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 FHL2Q14192 279 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 SAPCD1Q5SSQ6 148 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 C8orf49Q96NF6 230 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 MAP1LC3BQ9GZQ8 125 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 SDF2L1Q9HCN8 221 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 PRO0255Q9UI72 69 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 PKHD1P08F94 4074 aa11.91□□□□□ -0.5
SFSWAP-205ENST00000537164 NBDYA0A0U1RRE5 68 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 A0A1B0GVY2 172 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 BCL2L11O43521 198 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 GCGP01275 180 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 PFN1P07737 140 aaKnown RBP11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 ESRGQ1W209 222 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 C11orf21Q9P2W6 132 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 NAGKQ9UJ70 344 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
SFSWAP-205ENST00000537164 UMAD1C9J7I0 102 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 M0R2P5 195 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 FHITP49789 147 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 CRYBA4P53673 196 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 ZFP69Q49AA0 526 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 PRNTQ86SH4 94 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 HHLA3Q9XRX5 114 aa11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 MRPS16Q9Y3D3 137 aaKnown RBP11.89□□□□□ -0.51
SFSWAP-205ENST00000537164 KANTRA0A1W2PQU2 76 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 PEX7O00628 323 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 PAX4O43316 350 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 UBE2G2P60604 165 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 C1orf134Q5TEV5 83 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 COX8CQ7Z4L0 72 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 STOML3Q8TAV4 291 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 MBD3L1Q8WWY6 194 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 ZNF479Q96JC4 524 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 TCEAL7Q9BRU2 100 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 Q9H8V8 135 aa11.88□□□□□ -0.51
SFSWAP-205ENST00000537164 TRAV4A0A0B4J268 109 aa11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 IFNA7P01567 189 aa11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 PPT1P50897 306 aa11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 ZNF471Q9BX82 626 aaPredicted RBP11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 ICOSQ9Y6W8 199 aa11.87□□□□□ -0.51
SFSWAP-205ENST00000537164 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
SFSWAP-205ENST00000537164 EIF5AP63241 154 aaKnown RBP11.86□□□□□ -0.51
SFSWAP-205ENST00000537164 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
SFSWAP-205ENST00000537164 PTH2Q96A98 100 aa11.86□□□□□ -0.51
SFSWAP-205ENST00000537164 SFTA3P0C7M3 94 aa11.85□□□□□ -0.51
SFSWAP-205ENST00000537164 TMUB2Q71RG4 321 aa11.85□□□□□ -0.51
SFSWAP-205ENST00000537164 Q86TA4 180 aa11.85□□□□□ -0.51
SFSWAP-205ENST00000537164 C9orf85Q96MD7 179 aa11.85□□□□□ -0.51
SFSWAP-205ENST00000537164 TRGV4A0A0C4DH28 118 aa11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 TCTE3Q8IZS6 198 aa11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 FMC1Q96HJ9 113 aa11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 ZFP30Q9Y2G7 519 aa11.84□□□□□ -0.51
SFSWAP-205ENST00000537164 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 CIDEAO60543 219 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 TPT1P13693 172 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 TTC32Q5I0X7 151 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 Q6ZNX1 250 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 OR4C5Q8NGB2 326 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 FAM213BQ8TBF2 198 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 SFT2D1Q8WV19 159 aa11.83□□□□□ -0.52
SFSWAP-205ENST00000537164 IGKV3D-20A0A0C4DH25 116 aa11.82□□□□□ -0.52
SFSWAP-205ENST00000537164 PFDN1O60925 122 aa11.82□□□□□ -0.52
SFSWAP-205ENST00000537164 ORM1P02763 201 aa11.82□□□□□ -0.52
SFSWAP-205ENST00000537164 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-205ENST00000537164 ZNF876PQ49A33 203 aa11.82□□□□□ -0.52
SFSWAP-205ENST00000537164 KRTAP1-5Q9BYS1 174 aa11.82□□□□□ -0.52
SFSWAP-205ENST00000537164 K7EQD1 137 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 PAGE4O60829 102 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 LTAP01374 205 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 CRIP1P50238 77 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 PIK3CD-AS1Q5SR53 167 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 CST9LP1Q5W188 147 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 NEGR1Q7Z3B1 354 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
SFSWAP-205ENST00000537164 RS1O15537 224 aa11.8□□□□□ -0.52
SFSWAP-205ENST00000537164 H2AFB1P0C5Y9 115 aa11.8□□□□□ -0.52
SFSWAP-205ENST00000537164 GATA1P15976 413 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-205ENST00000537164 UBE2G1P62253 170 aa11.8□□□□□ -0.52
SFSWAP-205ENST00000537164 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
SFSWAP-205ENST00000537164 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
SFSWAP-205ENST00000537164 C9JCJ5 164 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms