RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 OR51A4Q8NGJ6 313 aa-0.07□□□□□ -2.42
CCDC7-208ENST00000537047 PCBD2Q9H0N5 130 aa-0.07□□□□□ -2.42
CCDC7-208ENST00000537047 MED31Q9Y3C7 131 aa-0.07□□□□□ -2.42
CCDC7-208ENST00000537047 FAM135BQ49AJ0 1406 aa-0.07□□□□□ -2.42
CCDC7-208ENST00000537047 MCRIP1C9JLW8 97 aa-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 CDC42EP2O14613 210 aa-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 IGKCP01834 107 aa-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 SDC4P31431 198 aa-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 HRCT1Q6UXD1 115 aa-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 THEM6Q8WUY1 208 aa-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.08□□□□□ -2.42
CCDC7-208ENST00000537047 A2MP01023 1474 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 HBDP02042 147 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 CCKP06307 115 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 IL7P13232 177 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 G0S2P27469 103 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 CKS2P33552 79 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 POLR2HP52434 150 aaKnown RBP-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 NAT14Q8WUY8 206 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 CBLN4Q9NTU7 201 aa-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 AFDNP55196 1824 aaKnown RBP-0.09□□□□□ -2.42
CCDC7-208ENST00000537047 COL7A1Q02388 2944 aa-0.1□□□□□ -2.42
CCDC7-208ENST00000537047 BLMP54132 1417 aaPredicted RBP-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 IGHV1-24A0A0C4DH33 117 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 LOC107984640A0A0U1RRK4 108 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 PNMA8CA0A1B0GUJ8 204 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 UQCRQO14949 82 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 MPC1LP0DKB6 136 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 RPL22P35268 128 aaKnown RBP-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 GNG10P50151 68 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 IQCJQ1A5X6 159 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 UNQ5815/PRO19632Q6UWF5 114 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 OR5A2Q8NGI9 324 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 OR9Q1Q8NGQ5 310 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 PPP1R1CQ8WVI7 109 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 DSCR8Q96T75 97 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 TRAPPC2LQ9UL33 140 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 CDK12Q9NYV4 1490 aaPredicted RBP-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 HERC1Q15751 4861 aa-0.1□□□□□ -2.43
CCDC7-208ENST00000537047 TPRP12270 2363 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 IGF2RP11717 2491 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 IFNA21P01568 189 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 OR4S1Q8NGB4 309 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 OTOSQ8NHW6 89 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 COA4Q9NYJ1 87 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 NINQ8N4C6 2090 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 CPDO75976 1380 aa-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-208ENST00000537047 COL6A3P12111 3177 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 TRBV10-1A0A0K0K1A3 114 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 TEX49A0A1B0GTD5 131 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 M0QZK8 103 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 APOC1P02654 83 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 ADCYAP1P18509 176 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 POLR2JP52435 117 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 TOMM20LQ6UXN7 152 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 BRK1Q8WUW1 75 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 VPS25Q9BRG1 176 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 PRR15LQ9BU68 103 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 CENPHQ9H3R5 247 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 OTOGQ6ZRI0 2925 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 TANC1Q9C0D5 1861 aa-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 HRNRQ86YZ3 2850 aaPredicted RBP-0.12□□□□□ -2.43
CCDC7-208ENST00000537047 NCOR2Q9Y618 2525 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 DLEC1Q9Y238 1755 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 RREB1Q92766 1687 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 RPL7P18124 248 aaKnown RBP-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 PPP1R2P3Q6NXS1 205 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 CCDC115Q96NT0 180 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 FAT3Q8TDW7 4589 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 PTPRGP23470 1445 aa-0.13□□□□□ -2.43
CCDC7-208ENST00000537047 TRAV12-2A0A075B6T6 113 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 A0A1B0GV72 72 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 C9JAW5 83 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 OR2H2O95918 312 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 SLC25A5P05141 298 aaKnown RBP-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 PCBD1P61457 104 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 PSPHP78330 225 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 TMEM128Q5BJH2 165 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 PPDPFLQ8WWR9 84 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 TMEM141Q96I45 108 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 BET1LQ9NYM9 111 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 SMPXQ9UHP9 88 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 V9GYQ6 96 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 HIVEP1P15822 2718 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 FER1L6Q2WGJ9 1857 aa-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 LRP1Q07954 4544 aaKnown RBP-0.14□□□□□ -2.43
CCDC7-208ENST00000537047 HERC2O95714 4834 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 TENM4Q6N022 2769 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 MED23Q9ULK4 1368 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 F2Z2F3 143 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 PYYP10082 97 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 HIST1H1BP16401 226 aaKnown RBP-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 TFAMQ00059 246 aaKnown RBP-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 PLGLB1Q02325 96 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 ESPL1Q14674 2120 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 SAMD13Q5VXD3 122 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 METTL1Q9UBP6 276 aaKnown RBP-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
CCDC7-208ENST00000537047 KIDINS220Q9ULH0 1771 aa-0.16□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms